Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0250
         (397 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   1.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   2.3  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 154 EHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
           E  ++ C +C A DH+   C   P     IVC
Sbjct: 307 EDRSSLCLHCGAADHRAASCTSDP---KCIVC 335


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 92  PSGDPRPPNSCSPGDPLVLERPPP 21
           P   PRPP++     P ++ +PPP
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQPPP 265


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -3

Query: 92  PSGDPRPPNSCSPGD---PLVLERPPPR 18
           P   P PP+S SPG    P VL++  P+
Sbjct: 784 PPPPPPPPSSLSPGGVPRPTVLQKLDPQ 811


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,138
Number of Sequences: 2352
Number of extensions: 4294
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)