Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0250
(397 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p pro... 99 2e-21
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 99 2e-21
AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA... 99 2e-21
U87150-1|AAB47553.1| 404|Drosophila melanogaster muscle-specifi... 34 0.059
U85651-1|AAB51251.1| 405|Drosophila melanogaster WHO protein. 34 0.059
U72331-1|AAB17350.1| 404|Drosophila melanogaster putative RNA-b... 34 0.059
BT001500-1|AAN71255.1| 228|Drosophila melanogaster LD34273p pro... 34 0.059
AY069862-1|AAL40007.1| 406|Drosophila melanogaster SD10595p pro... 34 0.059
AF003106-1|AAB60946.1| 407|Drosophila melanogaster KH-domain pr... 34 0.059
AE014297-3094|AAN13901.1| 375|Drosophila melanogaster CG10293-P... 34 0.059
AE014297-3093|AAZ52538.1| 380|Drosophila melanogaster CG10293-P... 34 0.059
AE014297-3092|AAF55952.1| 405|Drosophila melanogaster CG10293-P... 34 0.059
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 29 2.2
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 29 2.2
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 29 2.2
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 29 2.2
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 29 2.2
AY069307-1|AAL39452.1| 539|Drosophila melanogaster LD01582p pro... 28 3.9
AE014134-70|AAF51521.1| 539|Drosophila melanogaster CG11604-PA ... 28 3.9
BT021389-1|AAX33537.1| 531|Drosophila melanogaster LD21091p pro... 27 6.8
AY119287-1|AAM51147.1| 384|Drosophila melanogaster SD28142p pro... 27 6.8
AE014296-2295|AAF49805.1| 531|Drosophila melanogaster CG10083-P... 27 6.8
>AY089614-1|AAL90352.1| 417|Drosophila melanogaster RE28792p
protein.
Length = 417
Score = 98.7 bits (235), Expect = 2e-21
Identities = 53/101 (52%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCXXXXX 264
PEG NDLRRMQLRELAQLNGTLRE+D RC C +TDHK+W CPDKP +T+ IVC
Sbjct: 118 PEGHNDLRRMQLRELAQLNGTLRENDIQRC-TCGSTDHKSWQCPDKPIITNTIVCTSCGG 176
Query: 265 XXXXXXXXXXXXXXXXNP------IRLNIDEEYMSLMACAG 369
P + IDEEYMSLMA G
Sbjct: 177 NGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELG 217
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 98.7 bits (235), Expect = 2e-21
Identities = 53/101 (52%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCXXXXX 264
PEG NDLRRMQLRELAQLNGTLRE+D RC C +TDHK+W CPDKP +T+ IVC
Sbjct: 488 PEGHNDLRRMQLRELAQLNGTLRENDIQRC-TCGSTDHKSWQCPDKPIITNTIVCTSCGG 546
Query: 265 XXXXXXXXXXXXXXXXNP------IRLNIDEEYMSLMACAG 369
P + IDEEYMSLMA G
Sbjct: 547 TGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELG 587
>AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA
protein.
Length = 787
Score = 98.7 bits (235), Expect = 2e-21
Identities = 53/101 (52%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCXXXXX 264
PEG NDLRRMQLRELAQLNGTLRE+D RC C +TDHK+W CPDKP +T+ IVC
Sbjct: 488 PEGHNDLRRMQLRELAQLNGTLRENDIQRC-TCGSTDHKSWQCPDKPIITNTIVCTSCGG 546
Query: 265 XXXXXXXXXXXXXXXXNP------IRLNIDEEYMSLMACAG 369
P + IDEEYMSLMA G
Sbjct: 547 TGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELG 587
>U87150-1|AAB47553.1| 404|Drosophila melanogaster muscle-specific
protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>U85651-1|AAB51251.1| 405|Drosophila melanogaster WHO protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>U72331-1|AAB17350.1| 404|Drosophila melanogaster putative
RNA-binding protein protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>BT001500-1|AAN71255.1| 228|Drosophila melanogaster LD34273p
protein.
Length = 228
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 63 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 112
>AY069862-1|AAL40007.1| 406|Drosophila melanogaster SD10595p
protein.
Length = 406
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 241 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 290
>AF003106-1|AAB60946.1| 407|Drosophila melanogaster KH-domain
protein KH93F protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 241 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 290
>AE014297-3094|AAN13901.1| 375|Drosophila melanogaster CG10293-PB,
isoform B protein.
Length = 375
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>AE014297-3093|AAZ52538.1| 380|Drosophila melanogaster CG10293-PC,
isoform C protein.
Length = 380
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>AE014297-3092|AAF55952.1| 405|Drosophila melanogaster CG10293-PA,
isoform A protein.
Length = 405
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 160 DAARCANCSATDHKTWLC 213
DA RCANC++ HK +C
Sbjct: 352 DAIRCANCNSRGHKADIC 369
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 GLQEFGGRGSPEGQNDLRRMQLRELA-QLNGTLREHDAARCANCSATDH 198
G Q+ G+ GQ + Q L+ Q R +DA CAN SATD+
Sbjct: 1135 GQQKRSGQAQTFGQQTFAKDQDNALSSQRQQQRRPNDAGTCANSSATDN 1183
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 GLQEFGGRGSPEGQNDLRRMQLRELA-QLNGTLREHDAARCANCSATDH 198
G Q+ G+ GQ + Q L+ Q R +DA CAN SATD+
Sbjct: 1135 GQQKRSGQAQTFGQQTFAKDQDNALSSQRQQQRRPNDAGTCANSSATDN 1183
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 GLQEFGGRGSPEGQNDLRRMQLRELA-QLNGTLREHDAARCANCSATDH 198
G Q+ G+ GQ + Q L+ Q R +DA CAN SATD+
Sbjct: 1135 GQQKRSGQAQTFGQQTFAKDQDNALSSQRQQQRRPNDAGTCANSSATDN 1183
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 GLQEFGGRGSPEGQNDLRRMQLRELA-QLNGTLREHDAARCANCSATDH 198
G Q+ G+ GQ + Q L+ Q R +DA CAN SATD+
Sbjct: 1135 GQQKRSGQAQTFGQQTFAKDQDNALSSQRQQQRRPNDAGTCANSSATDN 1183
>AY069307-1|AAL39452.1| 539|Drosophila melanogaster LD01582p
protein.
Length = 539
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 172 CANCSATDHKTWLCPDKPNVTSAI 243
C NCS + H CP+ PN+ AI
Sbjct: 371 CRNCSGSYHGLKNCPNPPNLNIAI 394
>AE014134-70|AAF51521.1| 539|Drosophila melanogaster CG11604-PA
protein.
Length = 539
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 172 CANCSATDHKTWLCPDKPNVTSAI 243
C NCS + H CP+ PN+ AI
Sbjct: 371 CRNCSGSYHGLKNCPNPPNLNIAI 394
>BT021389-1|AAX33537.1| 531|Drosophila melanogaster LD21091p
protein.
Length = 531
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 80 PRPPNSCSPGDPLVLERPPP 21
P PP + SP PL +E P P
Sbjct: 327 PSPPRAASPAKPLPVEAPEP 346
>AY119287-1|AAM51147.1| 384|Drosophila melanogaster SD28142p
protein.
Length = 384
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 80 PRPPNSCSPGDPLVLERPPP 21
P PP + SP PL +E P P
Sbjct: 180 PSPPRAASPAKPLPVEAPEP 199
>AE014296-2295|AAF49805.1| 531|Drosophila melanogaster CG10083-PA
protein.
Length = 531
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 80 PRPPNSCSPGDPLVLERPPP 21
P PP + SP PL +E P P
Sbjct: 327 PSPPRAASPAKPLPVEAPEP 346
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,719,822
Number of Sequences: 53049
Number of extensions: 193943
Number of successful extensions: 748
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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