Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0250
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 75 2e-14
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 75 2e-14
AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 38 0.003
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 38 0.003
AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 38 0.003
Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 33 0.074
U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 33 0.074
AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 32 0.13
Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical p... 28 2.1
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 4.9
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 4.9
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 4.9
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 4.9
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 27 6.4
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 27 6.4
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 27 6.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 27 6.4
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 27 6.4
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 74.5 bits (175), Expect = 2e-14
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLREHD---AARCANCSATDHKTWLCPDKPNVTSAIVCXXXXXX 267
N+LR++QLRELA LNGT R D ARC+NC + +HK+W CPD PNVT+ I C
Sbjct: 402 NELRKLQLRELALLNGTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAF 461
Query: 268 XXXXXXXXXXXXXXXNPIRLNIDEEYMSLMACAG 369
+ +D+EY +LMA G
Sbjct: 462 GHISKDCKNPKGMYAS--EAGMDDEYSALMAELG 493
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 74.5 bits (175), Expect = 2e-14
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLREHD---AARCANCSATDHKTWLCPDKPNVTSAIVCXXXXXX 267
N+LR++QLRELA LNGT R D ARC+NC + +HK+W CPD PNVT+ I C
Sbjct: 402 NELRKLQLRELALLNGTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAF 461
Query: 268 XXXXXXXXXXXXXXXNPIRLNIDEEYMSLMACAG 369
+ +D+EY +LMA G
Sbjct: 462 GHISKDCKNPKGMYAS--EAGMDDEYSALMAELG 493
>AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform a protein.
Length = 328
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR---EHDAARCANCSATDHK 201
+PEG++DL+R QL ELA +NGT R + A A +A H+
Sbjct: 188 APEGEDDLKRKQLMELAIINGTYRSGTDQSALAAAQLAAVKHQ 230
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR---EHDAARCANCSATDHK 201
+PEG++DL+R QL ELA +NGT R + A A +A H+
Sbjct: 230 APEGEDDLKRKQLMELAIINGTYRSGTDQSALAAAQLAAVKHQ 272
>AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform b protein.
Length = 403
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR---EHDAARCANCSATDHK 201
+PEG++DL+R QL ELA +NGT R + A A +A H+
Sbjct: 188 APEGEDDLKRKQLMELAIINGTYRSGTDQSALAAAQLAAVKHQ 230
>Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical
protein T23G11.3 protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.074
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR 153
+PEG ++L+R QL ELA +NGT R
Sbjct: 305 APEGTDELKRKQLMELAIINGTYR 328
>U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.074
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR 153
+PEG ++L+R QL ELA +NGT R
Sbjct: 305 APEGTDELKRKQLMELAIINGTYR 328
>AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical
protein K07H8.9 protein.
Length = 254
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDH 198
P+G+++L+R QL ELA +NGT R +CS DH
Sbjct: 223 PDGRDELKRRQLVELAIMNGTYR-------PSCSRIDH 253
>Z29443-11|CAK55173.1| 367|Caenorhabditis elegans Hypothetical
protein T07C4.11 protein.
Length = 367
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +1
Query: 103 LRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPN 228
L + R+L +L R H+ C A K W C P+
Sbjct: 291 LNNSKFRKLCELVKESRSHEVGELFECEAHGSKIWQCISSPS 332
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1613 EETTTSAVTEG-SGEENTVVAVVESSGEEPASSSTSIP 1649
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2278 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2314
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2341 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2377
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2721 EETTTSAVTEG-SGEDTTVVAVVESSGEQPASSSTSIP 2757
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2089 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2125
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2215 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2251
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2404 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2440
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2531 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2567
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2658 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2694
Score = 26.6 bits (56), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 2784 EETTTSAVTEG-SGEETTVVAVVESSGEEPASSSTSIP 2820
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E + AS S S+P
Sbjct: 1922 EETTTSVVTEG-SGEQTTVVAVVESSGEEPASSSTSIP 1958
Score = 26.2 bits (55), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 254 EEQTMAEVTLGLSGQSQVLWSVAEQLAQRAASCSRSVP 141
EE T + VT G SG+ + +V E ++ AS S S+P
Sbjct: 2152 EETTTSAVTEG-SGEDTTVVAVVELSGEQPASSSTSIP 2188
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 80 PRPPNSCSPGDPLVLERPPP 21
P P SC+P PLV++ P P
Sbjct: 397 PVPTTSCAPQKPLVVQPPVP 416
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 142 GTLREHDAARCANCSATDHKTWLCPDKP 225
G E +C NC H++ CP+ P
Sbjct: 445 GNNEERGPMKCFNCKGEGHRSAECPEPP 472
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 142 GTLREHDAARCANCSATDHKTWLCPDKP 225
G E +C NC H++ CP+ P
Sbjct: 445 GNNEERGPMKCFNCKGEGHRSAECPEPP 472
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 92 PSGDPRPPNSCSPGDPLVLERPPPRSEXXH 3
P G P PP PG P R PP + H
Sbjct: 257 PPGPPGPPTRRPPGPPGPPTRRPPGHQGHH 286
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 142 GTLREHDAARCANCSATDHKTWLCPDKP 225
G E +C NC H++ CP+ P
Sbjct: 445 GNNEERGPMKCFNCKGEGHRSAECPEPP 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,939,777
Number of Sequences: 27780
Number of extensions: 87411
Number of successful extensions: 530
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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