Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0249
         (510 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5A919 Cluster: Cta9 protein extension; n=2; Candida al...    33   3.8  
UniRef50_A5DB90 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q4Y1B8 Cluster: Putative uncharacterized protein; n=2; ...    32   6.6  

>UniRef50_Q5A919 Cluster: Cta9 protein extension; n=2; Candida
           albicans|Rep: Cta9 protein extension - Candida albicans
           (Yeast)
          Length = 427

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 47  ITYAFNKKNEIMLCTVKNNYKFLLMKFQLVWKFIQLFNK 163
           + YA+N  NE +   +K N KF  +K   V KF+ LF +
Sbjct: 345 LEYAYNSHNEDVPSFIKENKKFKFIKVGKVQKFVNLFEE 383


>UniRef50_A5DB90 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 425

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 47  ITYAFNKKNEIMLCTVKNNYKFLLMKFQLVWKFIQLFNKLASCC*DYK*HCSS 205
           + +AF  K+  +   +K+N KF  +K   V KF+ LF + AS        CSS
Sbjct: 369 LDFAFKDKSNSVPMYIKDNKKFKFIKIGKVQKFVNLFEEKASVDSQPSSRCSS 421


>UniRef50_Q4Y1B8 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 498

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 32  ITLNMITYAFNKKNEIMLCTVKNNYKFLLMKFQLVWKFIQLFNKL 166
           I L  + Y FNKK  +    +K+NY F    F L + ++ +FN +
Sbjct: 210 IFLMKLNYIFNKKKHVKYKDLKDNYSFYFYTF-LFYYYLYVFNNI 253


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,532,861
Number of Sequences: 1657284
Number of extensions: 7151316
Number of successful extensions: 12537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12536
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)