Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0248
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 337  YGGRCHRWLHC 305
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 310 EAIYDICRRNLDIERPTYTNLNRLIGQIV 396
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 593 LVGGLEACVCDLG 555
           L+GG  +C CDLG
Sbjct: 703 LMGGKWSCDCDLG 715


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 648 GPAYSNPCTCHDGGRFSPSG 589
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 429 RSECGPHRVPD*LGALPPYPLPTGHVRPVISAEKAYHEQLSVAEITNAC 575
           +S   PH   D     PP+P       PV +     +  LSV ++T  C
Sbjct: 722 QSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLTGQC 770


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 429 RSECGPHRVPD*LGALPPYPLPTGHVRPVISAEKAYHEQLSVAEITNAC 575
           +S   PH   D     PP+P       PV +     +  LSV ++T  C
Sbjct: 614 QSPLTPHEAFDVKLPPPPHPHHQPPRNPVGTNPHDINNPLSVNQLTGQC 662


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = +1

Query: 328 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 426
           C +     RPT+T L++ +  ++ ++   L+ +
Sbjct: 730 CWKECPKNRPTFTELSKSLEGLLENVAQYLQIE 762


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 259 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVS 399
           T H    +++    V  E IY+ CR    I +P   + +  +  +V+
Sbjct: 35  TEHNYTHNNEMYHSVKEEPIYESCR--FSINQPYLNHFDNSVTPMVN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,913
Number of Sequences: 336
Number of extensions: 3490
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)