Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0247
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical...    29   2.4  
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical...    29   3.2  
Z82059-5|CAB04879.2|  408|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 686 LNLFP*NQGDLNVFLTIGAEFQPNLNGSIV 597
           +N F     D +V+L +G+E  PNLNG IV
Sbjct: 756 INDFSFQHDDDSVWLMVGSELLPNLNGKIV 785


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 686 LNLFP*NQGDLNVFLTIGAEFQPNLNGSIV 597
           +N F     D +V+L +G+E  PNLNG IV
Sbjct: 756 INDFSFQHDDDSVWLMVGSELLPNLNGKIV 785


>AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical
           protein Y37A1B.13 protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 308 LRNTIRLSQSLLDISAPLITTKST*LLQCLKIFFSCRGKYSFSLD 442
           LRNT  +S  L+D   P +      + QC+++    RG++  + D
Sbjct: 314 LRNTDMISNQLIDHFIPFLPLSKFYVSQCIQVHLRKRGRHDLAKD 358


>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
           protein F33H1.4 protein.
          Length = 1385

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 555 IVSLSKKFELFILVSNITVWH 493
           +VSL+KKFE+  LV +   WH
Sbjct: 852 VVSLNKKFEVIHLVRHFNAWH 872


>AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37A1B.12 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 308 LRNTIRLSQSLLDISAPLITTKST*LLQCLKIFFSCRGKYSFSLD 442
           LRNT  +S  L+D   P +      + QC+++    RG++  + D
Sbjct: 237 LRNTELISNQLIDHYIPFLPLSKFYVSQCIQVHLRKRGRHDLAKD 281


>Z82059-5|CAB04879.2|  408|Caenorhabditis elegans Hypothetical
           protein T27E9.9 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -2

Query: 494 IMYGNIRCPDFVISEYKNQG*MNIYP 417
           I+ GNI  PD+V+ ++ +   + +YP
Sbjct: 219 ILKGNITLPDYVLVDFSSSSELRLYP 244


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 482 CHTLCQTVIFET 517
           CHTLC+T+IFE+
Sbjct: 293 CHTLCRTLIFES 304


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 482 CHTLCQTVIFET 517
           CHTLC+T+IFE+
Sbjct: 359 CHTLCRTLIFES 370


>U39997-9|AAA81101.2|  468|Caenorhabditis elegans Hypothetical
           protein F56D1.1 protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 630 CPYCKKNIKVPLVLRE*IQSH 692
           CP+C+K  + P  LRE I+ H
Sbjct: 81  CPFCEKKFRYPNKLREHIKIH 101


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,963,448
Number of Sequences: 27780
Number of extensions: 281245
Number of successful extensions: 617
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)