Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0246
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 184 5e-47
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 184 6e-47
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 183 8e-47
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 182 3e-46
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 6e-46
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 1e-38
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 153 1e-37
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 146 9e-36
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 138 3e-33
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 7e-33
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 108 4e-24
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 107 5e-24
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 107 7e-24
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 104 5e-23
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 89 2e-18
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 57 9e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 56 2e-08
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 46 3e-05
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 39 0.003
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.13
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.8
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 29 3.7
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 28 4.9
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 4.9
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4) 28 6.5
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 28 6.5
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 28 6.5
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 184 bits (448), Expect = 5e-47
Identities = 87/100 (87%), Positives = 89/100 (89%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 212
Score = 182 bits (444), Expect = 1e-46
Identities = 84/100 (84%), Positives = 89/100 (89%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE++DLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 733
Score = 140 bits (339), Expect = 8e-34
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 65 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 244
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 245 GKHDP 259
GKH P
Sbjct: 123 GKHVP 127
Score = 139 bits (337), Expect = 1e-33
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 251 HDP 259
H P
Sbjct: 646 HVP 648
Score = 139 bits (336), Expect = 2e-33
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 254 DP 259
P
Sbjct: 574 VP 575
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 212 GFSSLLMERLSVDYGKKSKLEFAIYPAP 239
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 733 GFSSLLMERLSVDYGKKSKLEFAIYPAP 760
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTV 291
F F + + PRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 184 bits (447), Expect = 6e-47
Identities = 86/100 (86%), Positives = 89/100 (89%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 581
Score = 183 bits (446), Expect = 8e-47
Identities = 85/100 (85%), Positives = 89/100 (89%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 148
Score = 141 bits (341), Expect = 4e-34
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 139 bits (336), Expect = 2e-33
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 254 DP 259
P
Sbjct: 495 VP 496
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 148 GFSSLLMERLSVDYGKKSKLEFAIYPAP 175
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 581 GFSSLLMERLSVDYGKKSKLEFAIYPAP 608
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 183 bits (446), Expect = 8e-47
Identities = 85/100 (85%), Positives = 89/100 (89%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKEI+DLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 147
Score = 139 bits (336), Expect = 2e-33
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 254 DP 259
P
Sbjct: 61 VP 62
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 147 GFTSLLMERLSVDYGKKSKLEFAIYPAP 174
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 182 bits (442), Expect = 3e-46
Identities = 85/100 (85%), Positives = 88/100 (88%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+DLVLDR RKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSG 148
Score = 140 bits (338), Expect = 1e-33
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 148 GFASLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 180 bits (439), Expect = 6e-46
Identities = 83/100 (83%), Positives = 88/100 (88%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE++DLVLDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 952
Score = 175 bits (426), Expect = 2e-44
Identities = 80/100 (80%), Positives = 87/100 (87%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE +D+VLDR+RKLAD CTGLQGFLIFHSFGGGTG G
Sbjct: 480 TVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSG 519
Score = 138 bits (334), Expect = 3e-33
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 254 DP 259
P
Sbjct: 866 VP 867
Score = 136 bits (330), Expect = 1e-32
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 254 DP 259
P
Sbjct: 433 VP 434
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 519 GFTSLLMERLSVDYGKKSKLEFAIYPAP 546
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 952 GFTSLLMERLSVDYGKKSKLEFAIYPAP 979
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 176 bits (428), Expect = 1e-44
Identities = 79/100 (79%), Positives = 88/100 (88%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GK+++++VLDR+RKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSG 133
Score = 172 bits (418), Expect = 2e-43
Identities = 77/100 (77%), Positives = 87/100 (87%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GK+ +D VLDRIRKLADQC+GLQGFL+FHSFGGGTG G
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSG 566
Score = 137 bits (332), Expect = 5e-33
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 254 DP 259
P
Sbjct: 480 VP 481
Score = 109 bits (261), Expect = 2e-24
Identities = 45/48 (93%), Positives = 47/48 (97%)
Frame = +2
Query: 116 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHDP 259
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 133 GFSSLLMERLSVDYGKKSKLEFAIYPAP 160
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF++LL+ERL VDYGKKSKLEFAIYPAP
Sbjct: 566 GFSALLLERLSVDYGKKSKLEFAIYPAP 593
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 175 bits (427), Expect = 2e-44
Identities = 81/100 (81%), Positives = 86/100 (86%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE++D VLDR+RKLAD CTGLQGFLIFHSFGGGTG G
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSG 148
Score = 139 bits (336), Expect = 2e-33
Identities = 59/63 (93%), Positives = 62/63 (98%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 148 GFSSLLMERLSVDYGKKSKLEFAIYPAP 175
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 175 bits (426), Expect = 2e-44
Identities = 79/100 (79%), Positives = 87/100 (87%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE +DL LDRIRKLADQCTGLQGFLIFHSFGGGTG G
Sbjct: 74 TVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSG 113
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2
Query: 176 MPTDKTIGGGDDSFNTFFSETGAGKHDP 259
MP+DKTIGGGDDSFNTFF+ETGAGKH P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFA+YPAP
Sbjct: 113 GFSSLLMERLSVDYGKKSKLEFAVYPAP 140
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 162 bits (393), Expect = 2e-40
Identities = 70/86 (81%), Positives = 81/86 (94%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++V+D+I
Sbjct: 974 PRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKI 1033
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK+ DQC+GLQGFLIFHSFGGGTG G
Sbjct: 1034 RKMTDQCSGLQGFLIFHSFGGGTGSG 1059
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF SL+ E L VDYGKKSKLEFA+YPAP
Sbjct: 1059 GFASLITEHLSVDYGKKSKLEFAVYPAP 1086
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 156 bits (378), Expect = 1e-38
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 468
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 469 GFLIFHSFGGGTGLG 513
GFLIFHSFGGGTG G
Sbjct: 71 GFLIFHSFGGGTGSG 85
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 85 GFSSLLMERLSVDYGKKSKLEFAIYPAP 112
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 153 bits (371), Expect = 1e-37
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 298 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 477
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 478 IFHSFGGGTGLG 513
IFHSFGGGTG G
Sbjct: 62 IFHSFGGGTGSG 73
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 73 GFSSLLMERLSVDYGKKSKLEFAIYPAP 100
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 146 bits (355), Expect = 9e-36
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = +1
Query: 298 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 477
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 478 IFHSFGGGTGLG 513
IFHSFGGGTG G
Sbjct: 62 IFHSFGGGTGSG 73
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFA+YPAP
Sbjct: 73 GFSSLLMERLSVDYGKKSKLEFAVYPAP 100
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 138 bits (334), Expect = 3e-33
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 132 bits (320), Expect = 2e-31
Identities = 68/100 (68%), Positives = 73/100 (73%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGK+ VD VLDR+RKLADQC+GLQGF IFHSFGGGTG G
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSG 138
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFA+YPAP
Sbjct: 138 GFSSLLMERLSVDYGKKSKLEFAVYPAP 165
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 137 bits (331), Expect = 7e-33
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVR 306
F F + PRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 251 H 253
H
Sbjct: 256 H 256
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGK+SKLEFA+YPAP
Sbjct: 279 GFSSLLMERLSVDYGKRSKLEFAVYPAP 306
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 439 KLADQCTGLQGFLIFHSFGGGTGLG 513
K ADQCTGLQGFL+FHSFGGGTG G
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSG 279
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 108 bits (259), Expect = 4e-24
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 334 RKEAESCDCLQGFQLTHSLGGGTGSG 359
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +2
Query: 56 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 235
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 236 TGAGKHDP 259
GK+ P
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 107 bits (258), Expect = 5e-24
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSG 146
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 107 bits (257), Expect = 7e-24
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 65
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C +QGF + HS GGGTG G
Sbjct: 66 RKEAESCDCIQGFQLTHSLGGGTGSG 91
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 104 bits (250), Expect = 5e-23
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C +QGF + HS GGGTG G
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSG 146
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 298 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 444
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 298 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 444
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/86 (43%), Positives = 55/86 (63%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D + D +
Sbjct: 17 PRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVL 76
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C +QG + + GGGTG G
Sbjct: 77 RKEAENCDCMQGVQLIQALGGGTGSG 102
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Frame = +1
Query: 355 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF I HS GGGT GLGSL
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSL 58
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL VDYGKKSKLEFAIYPAP
Sbjct: 23 GFSSLLMERLSVDYGKKSKLEFAIYPAP 50
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 445 ADQCTGLQGFLIFHSFGGGTGLG 513
ADQCTGLQGFLIFHSFGGGTG G
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSG 23
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +1
Query: 223 FLQRDRSWQARPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARG 387
F R+ RAV +D+E V+ + ++GT+R + Q + K + NN+A G
Sbjct: 55 FFTRENDDILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHG 112
Query: 388 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
G + +D VLD +++ ++C L GFL S GGTG G
Sbjct: 113 FSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSG 154
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +1
Query: 259 RAVFVDLEPTVVDEVRT--GTYRQLFHPEQLITGKEDAANNYARGHY--TI---GKEIVD 417
R V VD E V+ R G + Q +I G+ NN+A G++ +I G ++
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 418 LVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
+ +D +RK ++C G ++ HS GGTG G
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTGSG 130
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 348
PRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 433 IRKLADQCTGLQGFLIFHSFGGGTGLG 513
+RK A+ C +QGF + HS GGGTG G
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSG 27
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 253 RPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 378
+ RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 74 KARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 405
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 131 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 235
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 206 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 96
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 276 IDEDSTGSCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPC 151
ID D T CLP PVS V PP +++ G++ C
Sbjct: 661 IDGDKTTICLPHPVSASSVPPAEYPPGTKMNIS--DGGFVAC 700
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 247
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 248 KHDPV 262
KH PV
Sbjct: 296 KHAPV 300
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 300 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 410
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 304 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 483
+ T+ + HP Q + K + +NY +G + D + + D G G++
Sbjct: 1060 KLNTHPAIGHPSQAVKTKGASVSNYMPDGGYMGNPMAD-SMGGMDNDYDDYMGEGGYMPM 1118
Query: 484 HSFGGGTGLGSL 519
H GG G+G +
Sbjct: 1119 HGGMGGMGMGRM 1130
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 105 PESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTTP 260
P S S + WS +SL R P S LS L+ + EL TTP
Sbjct: 532 PGSASASLLSYPSTWSDRASLYDRIPARFSSSRSESLSDLTDSEQELDKTTP 583
>SB_24904| Best HMM Match : Op_neuropeptide (HMM E-Value=1.4)
Length = 507
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRGRYRL 509
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 142 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 186
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 547 STKRRSINKEVNPSRYLPRRSGRSGILADRYTGQRACGFCPKPNLRFPF 401
+T R + + N RY + +T +R C F P N+ FPF
Sbjct: 412 NTSRYGHDHDTNTLRYGHEHDTNTSRYEHEHTTKRMCSFRPGSNVVFPF 460
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 271 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 450
V +E TV DE G YR E ITGK + + YTI K ++ + ++ D
Sbjct: 39 VRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDKGDKHTLVIKSIEVKD 94
Query: 451 ----QCTGLQGFLIFHSF 492
+C G + +FH F
Sbjct: 95 GGYYKCKGAKTSKLFHLF 112
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 384 WSLHHWKG---NRRFGFGQNPQAR*PVYRSARIPDLPLLRGRYRL 509
W+L HW +F G + + P++ S I +LP+ R+R+
Sbjct: 763 WALEHWSDLLVGMKFTIGTDHKPLVPLFTSKMIDELPVRIQRFRM 807
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,064,741
Number of Sequences: 59808
Number of extensions: 449841
Number of successful extensions: 1302
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -