Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0246
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 174 3e-44
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 174 3e-44
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 174 3e-44
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 174 3e-44
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 168 3e-42
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 168 3e-42
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 167 5e-42
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 167 5e-42
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 163 6e-41
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 163 6e-41
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 163 8e-41
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 162 2e-40
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 161 5e-40
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 155 2e-38
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 155 2e-38
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 108 3e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 105 2e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 104 5e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 104 5e-23
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 2e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 2e-09
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.27
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 29 3.3
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 29 3.3
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 5.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 174 bits (424), Expect = 3e-44
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGGTG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 127 bits (307), Expect = 5e-30
Identities = 52/63 (82%), Positives = 60/63 (95%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKK+KLEF+IYPAP
Sbjct: 148 GFTSLLMERLSVDYGKKAKLEFSIYPAP 175
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 174 bits (424), Expect = 3e-44
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGGTG G
Sbjct: 108 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 147
Score = 125 bits (302), Expect = 2e-29
Identities = 51/62 (82%), Positives = 59/62 (95%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 254 DP 259
P
Sbjct: 61 VP 62
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKK+KLEF+IYPAP
Sbjct: 147 GFTSLLMERLSVDYGKKAKLEFSIYPAP 174
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 174 bits (424), Expect = 3e-44
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGGTG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 127 bits (307), Expect = 5e-30
Identities = 52/63 (82%), Positives = 60/63 (95%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKK+KLEF+IYPAP
Sbjct: 148 GFTSLLMERLSVDYGKKAKLEFSIYPAP 175
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 174 bits (424), Expect = 3e-44
Identities = 79/100 (79%), Positives = 85/100 (85%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGGGTG G
Sbjct: 109 TIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSG 148
Score = 127 bits (307), Expect = 5e-30
Identities = 52/63 (82%), Positives = 60/63 (95%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKK+KLEF+IYPAP
Sbjct: 148 GFTSLLMERLSVDYGKKAKLEFSIYPAP 175
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 168 bits (408), Expect = 3e-42
Identities = 73/100 (73%), Positives = 86/100 (86%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 105 bits (253), Expect = 2e-23
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 168 bits (408), Expect = 3e-42
Identities = 73/100 (73%), Positives = 86/100 (86%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F S + PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
T+GKE++D VLDRIR+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 107 TVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 105 bits (253), Expect = 2e-23
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 167 bits (406), Expect = 5e-42
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
R+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 104 bits (250), Expect = 4e-23
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 167 bits (406), Expect = 5e-42
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
R+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 104 bits (250), Expect = 4e-23
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (397), Expect = 6e-41
Identities = 68/86 (79%), Positives = 80/86 (93%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
R+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 103 bits (247), Expect = 1e-22
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 163 bits (397), Expect = 6e-41
Identities = 68/86 (79%), Positives = 80/86 (93%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRI
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
R+LAD C+GLQGF +FHSFGGGTG G
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSG 146
Score = 103 bits (247), Expect = 1e-22
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
Score = 57.6 bits (133), Expect = 6e-09
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSLLMERL VDYGKKSKLEF+IYPAP
Sbjct: 146 GFTSLLMERLSVDYGKKSKLEFSIYPAP 173
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 163 bits (396), Expect = 8e-41
Identities = 71/100 (71%), Positives = 85/100 (85%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
+ F S + PRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKE++D+V+DR+R+L ++C LQGFLIFHSFGGGTG G
Sbjct: 109 TIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSG 148
Score = 109 bits (262), Expect = 1e-24
Identities = 46/63 (73%), Positives = 52/63 (82%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 251 HDP 259
H P
Sbjct: 61 HVP 63
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTSL+MERL +DYGKK+KLEF+IYPAP
Sbjct: 148 GFTSLVMERLSIDYGKKAKLEFSIYPAP 175
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 162 bits (393), Expect = 2e-40
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = +1
Query: 214 FQHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 393
F F + + PRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 394 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
TIGKEI+D+V+DR+R+L + C GLQGFL+FHSFGGGTG G
Sbjct: 114 TIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSG 153
Score = 109 bits (263), Expect = 1e-24
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +2
Query: 68 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 247
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 248 KHDP 259
KH P
Sbjct: 65 KHVP 68
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFT+LLMERL VDYGKKSKLEF IYPAP
Sbjct: 153 GFTALLMERLSVDYGKKSKLEFCIYPAP 180
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 161 bits (390), Expect = 5e-40
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRI
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
R+LA+ C GLQGF +FHSFGGGTG G
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSG 145
Score = 93.1 bits (221), Expect = 1e-19
Identities = 43/63 (68%), Positives = 46/63 (73%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 251 HDP 259
H P
Sbjct: 58 HVP 60
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GFTS+LMERL +YGKKSKLEF+IYPAP
Sbjct: 145 GFTSMLMERLSAEYGKKSKLEFSIYPAP 172
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 155 bits (377), Expect = 2e-38
Identities = 67/88 (76%), Positives = 80/88 (90%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLGSL 519
++LA+ C GLQGF+IFHSFGGGTG G L
Sbjct: 129 KRLAENCNGLQGFVIFHSFGGGTGSGFL 156
Score = 97.1 bits (231), Expect = 8e-21
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 254 DP 259
P
Sbjct: 68 VP 69
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF SLLMERL +YGKK KLEFAIYPAP
Sbjct: 154 GFLSLLMERLSTEYGKKPKLEFAIYPAP 181
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 155 bits (377), Expect = 2e-38
Identities = 67/99 (67%), Positives = 80/99 (80%)
Frame = +1
Query: 217 QHFLQRDRSWQARPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 396
Q F + + PRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 397 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGLG 513
IGKE++D+VLDRIRK + C GLQGFL+FHSFGGGTG G
Sbjct: 113 IGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSG 151
Score = 78.6 bits (185), Expect = 3e-15
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +2
Query: 74 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 253
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 254 DP 259
P
Sbjct: 65 VP 66
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF+SLLMERL V++GKKSKLEF++YPAP
Sbjct: 151 GFSSLLMERLSVEFGKKSKLEFSVYPAP 178
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 155 bits (377), Expect = 2e-38
Identities = 67/88 (76%), Positives = 80/88 (90%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 100
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLGSL 519
++LA+ C GLQGF+IFHSFGGGTG G L
Sbjct: 101 KRLAENCNGLQGFVIFHSFGGGTGSGFL 128
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 137 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHDP 259
++CLEHGIQPDG D T ++ NTFF+ET GKH P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 510 GFTSLLMERLFVDYGKKSKLEFAIYPAP 593
GF SLLMERL +YGKK KLEFAIYPAP
Sbjct: 126 GFLSLLMERLSTEYGKKPKLEFAIYPAP 153
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 108 bits (259), Expect = 3e-24
Identities = 50/86 (58%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 108 bits (259), Expect = 3e-24
Identities = 50/86 (58%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD I
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 107 bits (258), Expect = 4e-24
Identities = 49/86 (56%), Positives = 61/86 (70%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSG 146
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 105 bits (253), Expect = 2e-23
Identities = 48/86 (55%), Positives = 59/86 (68%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ C LQGF + HS GGGTG G
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSG 146
Score = 47.2 bits (107), Expect = 9e-06
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 104 bits (249), Expect = 5e-23
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ LQGF + HS GGGTG G
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 104 bits (249), Expect = 5e-23
Identities = 48/86 (55%), Positives = 60/86 (69%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGTGLG 513
RK A+ LQGF + HS GGGTG G
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSG 146
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
R+ A+ L+GF + HS GGGT GLGSL
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 435
PRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL I
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 436 RKLADQCTGLQGFLIFHSFGGGT--GLGSL 519
R+ A+ L+GF + HS GGGT GLGSL
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSL 150
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = +2
Query: 71 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 250
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 251 HDP 259
+ P
Sbjct: 59 YVP 61
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 426
PRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 427 DRIRKLADQCTGLQGFLIFHSFGGGTGLGS 516
D I + A+ L G L HS GGTG G+
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.050
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 83 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 175
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 PRAVFVDLEPTVVDEV-RTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 426
PRAV VDLEP V++ + ++ + LF+ + + A NN+A G Y G+E+ + ++
Sbjct: 63 PRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIM 121
Query: 427 DRIRKLADQCTGLQGFLIFHSFGGGTGLGS 516
D I + A+ L G L HS GGTG G+
Sbjct: 122 DIIIREAENTNNLDGILFTHSVSGGTGSGT 151
Score = 34.7 bits (76), Expect = 0.050
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 83 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 175
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 99 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTT 257
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST+
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAASTS 239
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 99 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTTP 260
++ +SRS P F W+T + + QT P+G T++ S++ ++TP
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 300
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 99 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTTP 260
++ +SRS P F W+T + + QT P+G T++ S++ ++TP
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 319
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 360 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 265
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 289 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 432
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,501,464
Number of Sequences: 27780
Number of extensions: 324277
Number of successful extensions: 897
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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