Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0245
(776 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 159 7e-41
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 159 7e-41
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 159 7e-41
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 149 9e-38
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 22 2.8
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 6.0
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 8.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 8.0
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 159 bits (387), Expect = 7e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 123 bits (297), Expect = 5e-30
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 159 bits (387), Expect = 7e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 123 bits (297), Expect = 5e-30
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 159 bits (387), Expect = 7e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 123 bits (297), Expect = 5e-30
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 244 PDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 301
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 149 bits (361), Expect = 9e-38
Identities = 68/74 (91%), Positives = 70/74 (94%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK E
Sbjct: 303 GTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHE 362
Query: 326 YDESGPSIVHRKCF 285
YDE GP IVHRKCF
Sbjct: 363 YDEGGPGIVHRKCF 376
Score = 109 bits (263), Expect = 7e-26
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFR P+ALFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLS
Sbjct: 244 PDGQVITIGNERFRAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLS 301
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 677 GSGHHHGKRKIPL-PKGSLPTLVLG 606
G HHHG +P+ P + P+ G
Sbjct: 1321 GHHHHHGGEGVPMGPANAAPSSPAG 1345
Score = 20.6 bits (41), Expect(2) = 2.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 716 RAPPSKSLTNFPDGSGHHH 660
R PPS+S HHH
Sbjct: 1299 RLPPSRSEDTLNSSHLHHH 1317
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.8 bits (49), Expect = 6.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 266 LPPAPAAGCSIQACN 222
LPP AGC+ Q C+
Sbjct: 167 LPPEDGAGCATQPCS 181
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 23.4 bits (48), Expect = 8.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 495 HGGTTDNTVLAYKSLRMSTSHF 560
H TTD LAY S R H+
Sbjct: 125 HADTTDCCCLAYDSFRCYLQHY 146
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 8.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 518 GVGVQVLTDVHVALHDGVICGLVDAASFHTQER 616
G GV+ L +HVA G C L S Q+R
Sbjct: 38 GGGVRGLARIHVAAGFGSCCALFGVQSKLAQKR 70
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,350
Number of Sequences: 2352
Number of extensions: 19693
Number of successful extensions: 56
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -