Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0245
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 159 2e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 159 2e-39
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 159 2e-39
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 159 2e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 159 2e-39
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 153 1e-37
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 151 4e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 90 1e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 83 3e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 8e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 4e-04
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 32 0.40
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.70
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 3.7
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 28 6.5
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 28 6.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (278), Expect = 2e-26
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (278), Expect = 2e-26
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (278), Expect = 2e-26
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 259 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 319 YDESGPSIVHRKCF 332
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 200 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 257
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 289 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 348
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 349 YDESGPSIVHRKCF 362
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 230 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 287
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 159 bits (387), Expect = 2e-39
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
Score = 116 bits (280), Expect = 1e-26
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 153 bits (372), Expect = 1e-37
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303 GTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 116 bits (278), Expect = 2e-26
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 244 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 151 bits (367), Expect = 4e-37
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 302 GTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 326 YDESGPSIVHRKCF 285
YDESGPSIVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
Score = 112 bits (269), Expect = 3e-25
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P GQVIT+GNERFRCP+ LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLS
Sbjct: 243 PDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLS 300
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = -1
Query: 515 IVRGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQM 345
+ G ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQM
Sbjct: 357 VTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQM 416
Query: 344 WISKQEYDESGPSIVHRKC 288
W+SK EYDESG SIV +KC
Sbjct: 417 WVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 327
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 326 YDESGPSIVHRKCF 285
Y++ G S +H++ F
Sbjct: 361 YEDMGASAMHKRFF 374
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 682 PTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
P I + N FR P+ LF+P +G E G+ SIMKCDVD+R+ LY+N VLS
Sbjct: 242 PDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLS 299
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 13/78 (16%)
Frame = -1
Query: 506 GTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL- 363
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 362 -STFQQMWISKQEYDESG 312
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = -2
Query: 688 TFPTGQVITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
T P G+VI +G ERF P+ LFQP + +E G+ E + I D+D R D Y + VLS
Sbjct: 245 TLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLS 304
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1
Query: 452 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 303
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 667 ITMGNERFRCPKALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
+ +G ERF P+ F P F E I +T I +C +D+R+ LY N VLS
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLS 329
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/69 (31%), Positives = 43/69 (62%)
Frame = -1
Query: 533 LVRQHRIVRGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 354
L R + G ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 353 QQMWISKQE 327
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = -2
Query: 655 NERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 509
N RF C + LF+P G++ G+H+ + +I++C +D R+ LY N L+
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLA 478
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 667 ITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 512
I +G ERF P+ LF PS + ++ CG+ E SI +C +R L N ++
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = -1
Query: 515 IVRGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQM 345
++ G++ +PG +R+++E+ ++ P+ + + + P+ W G L + S
Sbjct: 314 VIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP-- 369
Query: 344 WISKQEYDESGPSIVHRKCF*T 279
WI+++++DE G S+ F T
Sbjct: 370 WINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 667 ITMGNERFRCPKALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 512
I +G ERF P+ LF PS + ++ CG+ E SI +C +R L N ++
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIV 314
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = -1
Query: 515 IVRGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQM 345
++ G++ +PG +R+++E+ ++ P+ + + + P+ W G L + S
Sbjct: 314 VIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTHS--WHCGQELLTASKVP-- 369
Query: 344 WISKQEYDESGPSIVHRKCF*T 279
WI+++++DE G S+ F T
Sbjct: 370 WINRKDWDERGDSLEFSNFFQT 391
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -2
Query: 403 STPYGSVDRSSPPSLPSNKCG-SRNKSTTSLAPPLY-TGSASKRTARRCLQHPRPAAQFR 230
S+ Y + +RSSPP ++ C S + +T PL+ + S SK +A + P P++ F
Sbjct: 1128 SSVYSADERSSPPLAGNSTCSVSTSSDSTPDECPLHGSRSFSKISALKIQSSPSPSSSFS 1187
Query: 229 LVISVNLIVRKILL 188
+S+ + LL
Sbjct: 1188 RFLSLRRTAKPSLL 1201
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 558 SATWTSVRTCTPTPYCPWYHHVPWNRRPYAKGNHSS 451
++TW+ V C+P W VP R ++K +H S
Sbjct: 364 NSTWSHVPVCSPLSCHNWPPRVPHARILFSKSSHGS 399
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 638 PKGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 540
PKG+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 638 PKGSLPTLVLGYGSLRHPRDHI*LHHEVRRGHP 540
PKG+L LV G G ++ +D L HE+ HP
Sbjct: 40 PKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,898,853
Number of Sequences: 27780
Number of extensions: 437618
Number of successful extensions: 1349
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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