Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0244
         (784 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57128 Cluster: PREDICTED: similar to CG17258-PA...    41   0.040
UniRef50_Q7PNE4 Cluster: ENSANGP00000011406; n=2; Culicidae|Rep:...    37   0.50 
UniRef50_UPI00015A5EFF Cluster: Uncharacterized protein C4orf8 (...    35   2.0  
UniRef50_Q9YVI9 Cluster: ORF MSV253 leucine rich repeat gene fam...    35   2.0  
UniRef50_Q54GP4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  

>UniRef50_UPI0000D57128 Cluster: PREDICTED: similar to CG17258-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG17258-PA - Tribolium castaneum
          Length = 412

 Score = 40.7 bits (91), Expect = 0.040
 Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -2

Query: 534 TRTKIIL-LTFSESSLVLHCLKVPQFLQRMEKRAREIEE*HAMIRERRNQMEEDRIRL 364
           TR K+   + +SE  +++   K P+F+Q +E+RA E  + H ++ ER+ QM+E R R+
Sbjct: 126 TRCKVAPPVDYSEKFMIM-TQKAPKFVQELEERALERAKRHEVVLERKRQMDETRARI 182


>UniRef50_Q7PNE4 Cluster: ENSANGP00000011406; n=2; Culicidae|Rep:
           ENSANGP00000011406 - Anopheles gambiae str. PEST
          Length = 464

 Score = 37.1 bits (82), Expect = 0.50
 Identities = 17/40 (42%), Positives = 27/40 (67%)
 Frame = -2

Query: 477 LKVPQFLQRMEKRAREIEE*HAMIRERRNQMEEDRIRLKQ 358
           L +P+FL +M++RA E  + H   +ERR +ME++R   KQ
Sbjct: 197 LMIPKFLAKMQQRALERSQRHQEAKERRMRMEKEREDAKQ 236


>UniRef50_UPI00015A5EFF Cluster: Uncharacterized protein C4orf8
           (Protein IT14).; n=2; Danio rerio|Rep: Uncharacterized
           protein C4orf8 (Protein IT14). - Danio rerio
          Length = 1204

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 13/36 (36%), Positives = 26/36 (72%)
 Frame = -2

Query: 453 RMEKRAREIEE*HAMIRERRNQMEEDRIRLKQQVIN 346
           R+E  ARE+EE   +++E+R + +E+   LKQ++++
Sbjct: 852 RLEAEARELEEQQQLLKEQRRRQQEEEAALKQELLH 887


>UniRef50_Q9YVI9 Cluster: ORF MSV253 leucine rich repeat gene family
           protein, similar to Amsacta moorei entomopoxvirus Q3 ORF
           SW:P28854; n=1; Melanoplus sanguinipes
           entomopoxvirus|Rep: ORF MSV253 leucine rich repeat gene
           family protein, similar to Amsacta moorei entomopoxvirus
           Q3 ORF SW:P28854 - Melanoplus sanguinipes entomopoxvirus
           (MsEPV)
          Length = 400

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +2

Query: 101 IKSISKKQFNFNDFVLGISLKSFLFIYCPCRQT--CIRPTKLTILRCFTSN*RQS*RMMP 274
           I+  + K+ N NDF   +SL + L +   C     CI P  +  L+C+  N +    + P
Sbjct: 279 IQEFTCKKCNINDFSFLLSLSNLLILNISCNDVLKCILPNSIKSLKCYCCNIKDFSFLSP 338

Query: 275 YG*PLIIKEPDMCRNRDGPLT 337
                 +K  D+C N +  +T
Sbjct: 339 L---KKLKYLDICNNPNSNIT 356


>UniRef50_Q54GP4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 984

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 15/40 (37%), Positives = 29/40 (72%)
 Frame = -1

Query: 616 MVRTWNLIYLFIIGLNSGLSGEFSTLTYTYQNYIAYIFRI 497
           ++R  +LIYLFI+G  + L+G+ S   + Y+NY +++F++
Sbjct: 857 LLREKHLIYLFILG-GAALNGQLSIFKFIYENY-SFLFKL 894


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,872,293
Number of Sequences: 1657284
Number of extensions: 14276344
Number of successful extensions: 31660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31642
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)