Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0244
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    27   0.22 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   0.22 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 535 YTYQNYIAYIFRIVVGPSLFKGAAV 461
           ++YQ+Y++YIF  ++G   +K  A+
Sbjct: 126 WSYQSYMSYIFANIMGLEFYKQFAI 150


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 535 YTYQNYIAYIFRIVVGPSLFKGAAV 461
           ++YQ+Y++YIF  ++G   +K  A+
Sbjct: 126 WSYQSYMSYIFANIMGLEFYKQFAI 150


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 569 IQSNNEQINKVPCSYHQLQVSLVRWANIL 655
           +  NN  +N +  + H+    LV+WA ++
Sbjct: 204 VNENNTTVNNICQATHKQLFQLVQWAKLV 232


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -1

Query: 568 SGLSGEFSTLTYTYQNYIAYIFRIVVGPSLFKGAAVF 458
           +G++ E   LT+++ +   +  +I++  S+F     F
Sbjct: 213 NGVTSEKCNLTFSWYSKKVFYSKIIISGSIFMTTTSF 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,586
Number of Sequences: 336
Number of extensions: 4112
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)