Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0244
         (784 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060792-1|AAH60792.1|  528|Homo sapiens ACBD3 protein protein.        32   2.0  
BC045533-1|AAH45533.1|  528|Homo sapiens acyl-Coenzyme A binding...    32   2.0  
BC034563-1|AAH34563.2|  360|Homo sapiens ACBD3 protein protein.        32   2.0  
AL592045-1|CAH71922.1|  528|Homo sapiens acyl-Coenzyme A binding...    32   2.0  
AK025520-1|BAB15159.1|  528|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AB043587-1|BAB20592.2|  528|Homo sapiens golgi resident protein ...    32   2.0  
AY150218-1|AAN60219.1|  528|Homo sapiens peripherial benzodiazep...    31   4.7  
BC002366-1|AAH02366.1|  820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    30   8.2  
AF026402-1|AAB87902.1|  820|Homo sapiens U5 snRNP 100 kD protein...    30   8.2  

>BC060792-1|AAH60792.1|  528|Homo sapiens ACBD3 protein protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERRRIEEERLRLEQQ 242


>BC045533-1|AAH45533.1|  528|Homo sapiens acyl-Coenzyme A binding
           domain containing 3 protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERRRIEEERLRLEQQ 242


>BC034563-1|AAH34563.2|  360|Homo sapiens ACBD3 protein protein.
          Length = 360

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 44  EKRRREEEERLRREEEERRRIEEERLRLEQQ 74


>AL592045-1|CAH71922.1|  528|Homo sapiens acyl-Coenzyme A binding
           domain containing 3 protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERRRIEEERLRLEQQ 242


>AK025520-1|BAB15159.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21867 fis, clone HEP02419. ).
          Length = 528

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERRRIEEERLRLEQQ 242


>AB043587-1|BAB20592.2|  528|Homo sapiens golgi resident protein
           GCP60 protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERRRIEEERLRLEQQ 242


>AY150218-1|AAN60219.1|  528|Homo sapiens peripherial benzodiazepine
           receptor associated protein protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -2

Query: 447 EKRAREIEE*HAMIRERRNQMEEDRIRLKQQ 355
           EKR RE EE      E R ++EE+R+RL+QQ
Sbjct: 212 EKRRREEEERLRREEEERIRIEEERLRLEQQ 242


>BC002366-1|AAH02366.1|  820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 23 protein.
          Length = 820

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 468 PQFLQRMEKRAREIEE*HAMIRERRNQMEEDRIRLKQ 358
           P+FL + E+ A  ++     + ER+  +EE+R + KQ
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQ 197


>AF026402-1|AAB87902.1|  820|Homo sapiens U5 snRNP 100 kD protein
           protein.
          Length = 820

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 468 PQFLQRMEKRAREIEE*HAMIRERRNQMEEDRIRLKQ 358
           P+FL + E+ A  ++     + ER+  +EE+R + KQ
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQ 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,614,889
Number of Sequences: 237096
Number of extensions: 2215185
Number of successful extensions: 7465
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7465
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)