Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0242
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.61 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 316 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 411
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 263 SSPHKSPSVPYRPSRPDGGA 204
           ++P+KS + PY P+ P  G+
Sbjct: 63  NTPNKSSTSPYPPNHPLSGS 82


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 285 PDPQIPHRTRNRH 323
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 400 RGVPRGRHAAHCRRYDAKSSP 338
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 354 MPNLLHVIPVSDDSVFD 304
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 354 MPNLLHVIPVSDDSVFD 304
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 354 MPNLLHVIPVSDDSVFD 304
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -2

Query: 354 MPNLLHVIPVSDDSVFD 304
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 432 GQQREDDPDHVRNIQHARHVRRHPSR 509
           GQ    DP+ V   +   H+  HP +
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDK 928


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 696 SNKNPRSGEDLHEVVCEGHD 637
           S++  ++GE +H++  E HD
Sbjct: 336 SSQVSKAGELIHQIQTEDHD 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,421
Number of Sequences: 336
Number of extensions: 4495
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)