Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0242
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 1e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 186 2e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 186 2e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 186 2e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 7e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 7e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 181 4e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 181 4e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 163 8e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 9e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 153 1e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 5e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 92 3e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 80 1e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 64 7e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 57 1e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 5e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 1e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.11
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.8
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.8
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.2
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 2.3
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 2.3
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 2.3
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 3.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 3.1
At2g15320.1 68415.m01747 leucine-rich repeat family protein cont... 28 5.3
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 28 5.3
At2g32840.1 68415.m04020 proline-rich family protein Common fam... 24 6.3
At2g32840.2 68415.m04021 proline-rich family protein Common fam... 24 6.4
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 7.1
At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 28 7.1
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 7.1
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 28 7.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.3
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 9.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (453), Expect = 1e-47
Identities = 101/149 (67%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQAG-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPT 612
NREKMTQIMFETFNTPAMYVAIQA S + + VS T P P
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPH 175
Query: 613 PFCVWTWPVVTLTDYLMKILTRARVLVTT 699
LTDYLMKILT TT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYSFTT 204
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 186 bits (452), Expect = 2e-47
Identities = 98/149 (65%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQAG-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPT 612
NREKMTQIMFETFN+PAMYVAIQA S + + VS T P P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPH 175
Query: 613 PFCVWTWPVVTLTDYLMKILTRARVLVTT 699
LTDYLMKILT + TT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYMFTT 204
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 186 bits (452), Expect = 2e-47
Identities = 98/149 (65%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQAG-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPT 612
NREKMTQIMFETFN+PAMYVAIQA S + + VS T P P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPH 175
Query: 613 PFCVWTWPVVTLTDYLMKILTRARVLVTT 699
LTDYLMKILT + TT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYMFTT 204
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 186 bits (452), Expect = 2e-47
Identities = 98/149 (65%), Positives = 105/149 (70%), Gaps = 1/149 (0%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQAG-SRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPT 612
NREKMTQIMFETFN+PAMYVAIQA S + + VS T P P
Sbjct: 117 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPH 175
Query: 613 PFCVWTWPVVTLTDYLMKILTRARVLVTT 699
LTDYLMKILT + TT
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERGYMFTT 204
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEG++LPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/51 (74%), Positives = 45/51 (88%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+Y
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAY 55
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFNTPAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFNTPAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNTPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNVPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKA
Sbjct: 57 GDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKA 116
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFETFN PAMYVAIQA
Sbjct: 117 NREKMTQIMFETFNAPAMYVAIQA 140
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+Y
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY 55
Score = 94.3 bits (224), Expect = 7e-20
Identities = 44/45 (97%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 142 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 163 bits (397), Expect = 8e-41
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK
Sbjct: 58 GDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKV 117
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKMTQIMFE+F P+MY+ IQA
Sbjct: 118 NREKMTQIMFESFAFPSMYIGIQA 141
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
LSLY+SGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 143 LSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 187
Score = 89.4 bits (212), Expect = 2e-18
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTF 56
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (380), Expect = 9e-39
Identities = 66/84 (78%), Positives = 79/84 (94%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA
Sbjct: 12 GDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKA 71
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
+REKMTQIMFETF P+MY+ +QA
Sbjct: 72 DREKMTQIMFETFAVPSMYIGMQA 95
Score = 79.4 bits (187), Expect = 2e-15
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGR 641
LSL+ASGRTTG VLDSGDGV + VPIYEG ALPHAILRLDLAGR
Sbjct: 97 LSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGR 140
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 153 bits (371), Expect = 1e-37
Identities = 70/96 (72%), Positives = 80/96 (83%)
Frame = +1
Query: 220 RDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
RDG E + G+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 400 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 507
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +3
Query: 504 SRLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
S L LY+SGRTTG+VLD G+ V HTVP+YEGYALPH ILRLDL GRD
Sbjct: 129 SVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRD 175
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 211
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (242), Expect = 5e-22
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
G+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP
Sbjct: 56 GETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSK 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQA 507
NREKM + MFE +N +++ IQA
Sbjct: 116 NREKMIETMFEKYNFAGVFIQIQA 139
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGR 641
L+LYA G TG+V+DSGDGV H VP+ +GY+ PH R+++AGR
Sbjct: 141 LTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGR 184
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKD-----SYEEMRHR 271
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD + E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 GDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL
Sbjct: 71 GDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLT 130
Query: 427 PKANREKMTQIMFETFNTPAMYVAIQA 507
P +RE +I+FETFN P +Y+A+ +
Sbjct: 131 PPESREYTGEILFETFNVPGLYIAVNS 157
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 537 TGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAGRD 644
TG+V+D GDG H VP+ EGY + I + +AG+D
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKD 208
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 199
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 432
G +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN +
Sbjct: 78 GSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQ 137
Query: 433 ANREKMTQIMFETFNTPAMYVA 498
REK ++MFE + PA+++A
Sbjct: 138 QQREKAAELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 638
L+ +A+GR T +V+D G G P+++GY L A++ L G
Sbjct: 164 LTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGG 206
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 223 DGRYGTEGLL*GDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 399
D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 400 VLLTEAPLNPKANREK 447
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 202
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 477
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 478 TPAMYVAIQA 507
Y + QA
Sbjct: 117 VSGFYASEQA 126
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 113 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 205
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +1
Query: 292 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 471
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 472 FNTPAMYVA 498
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 459 HVRNIQHARHVRRHPSRLSLYASGRTTGIVLDSGDGVFHTVPIYEGYALPHAILRLDLAG 638
H +++ H R P + S +V+D G H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSI---LSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 639 R 641
+
Sbjct: 187 K 187
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 477
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 478 TPAMYVAIQA 507
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 237 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 100
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKANREK 447
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +1
Query: 247 LL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 426
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 427 PKANREK 447
REK
Sbjct: 221 VFRPREK 227
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 213 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 127
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.2
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 402 DGVFLGGDTQLIVEGMMPNLLHVIPVS 322
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEG 596
L+LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 510 LSLYASGRTTGIVLDSGDGVFHTVPIYEG 596
L+LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 414 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRLSLY 521
GSP+ +G + E+D D + NI+H + +H + LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 469 TFNTPAMYVAIQAGSRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPTP 615
T +TP+ S P PP +C +P + STP + +H PTP
Sbjct: 81 TPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH-PTP 128
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 535 PPVSCWTPATVSSTPCPSTRDTHFPTP 615
PP TP+T S TP P T +H PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 469 TFNTPAMYVAIQAGSRCTRPVVPPVSCWTPATVSSTPCPSTRDTHFPTP 615
T +TP+ S P PP +C +P + STP + +H PTP
Sbjct: 81 TPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH-PTP 128
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 535 PPVSCWTPATVSSTPCPSTRDTHFPTP 615
PP TP+T S TP P T +H PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g15320.1 68415.m01747 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 382
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 466 ETFNTPAMYVAIQAGSRCTRP-VVPPVSCWTPATVS-STPCPSTRDTHF 606
++ +P+ A++A +P +PP SC + S PC S R THF
Sbjct: 17 DSLTSPSDVSALKAFKATVKPNSIPPWSCLASWDFTVSDPCASPRRTHF 65
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 565 PSPESSTIPVVRPDAYSESRL 503
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
>At2g32840.1 68415.m04020 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 337
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 597 YALPHAILRLDLAGRDPHRLPHEDP 671
Y P I R + PH+ PH DP
Sbjct: 70 YTNPLPIRRSNSVTNSPHQPPHPDP 94
Score = 22.6 bits (46), Expect(2) = 6.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 657 PHEDPHPSAGSCYY 698
PH+ PHP S Y
Sbjct: 86 PHQPPHPDPSSLIY 99
>At2g32840.2 68415.m04021 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 291
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 597 YALPHAILRLDLAGRDPHRLPHEDP 671
Y P I R + PH+ PH DP
Sbjct: 70 YTNPLPIRRSNSVTNSPHQPPHPDP 94
Score = 22.6 bits (46), Expect(2) = 6.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 657 PHEDPHPSAGSCYY 698
PH+ PHP S Y
Sbjct: 86 PHQPPHPDPSSLIY 99
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 347 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 258
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g41830.1 68415.m05169 cyclin-related contains Pfam profile
PF02984: Cyclin, C-terminal domain
Length = 1025
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIV 125
H L+ +L+ H DH +++ PS S +S A + H+ IV
Sbjct: 342 HFLLSMLIKHLDHKSVLKHPSMQLNILEVTSSLSETAKVEHSATIV 387
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 532 VPPVSCWTPATVSSTPCPSTRDTHFPT 612
+PPV+ TP+ ++S P P T PT
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPT 64
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 423 QPQGQQREDDPDHVRNIQHARHVRRHPSRLSLYASGRTTGIVLDSGDG 566
QP+G+ E+ + NI+ A + + + + G+ +G VL+ G+G
Sbjct: 374 QPEGKVSENVLEGGDNIEFAEKEKDTTDSVQIESEGKVSGNVLEGGEG 421
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 213 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 91
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 398 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPHKSPSVPY 231
GC S + S + + C+ F + + T+PC Y R PL LC + S Y
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,329,194
Number of Sequences: 28952
Number of extensions: 414048
Number of successful extensions: 1360
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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