BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0240 (382 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_01_0410 + 2928382-2930973 32 0.13 12_02_1125 - 26327433-26328239 32 0.18 08_02_0191 + 14041201-14043894,14044354-14044632 31 0.31 04_04_0868 + 28874332-28875747 29 0.94 03_04_0084 - 17153428-17153502,17154158-17154433 29 1.2 08_02_0661 - 19780036-19781002,19781244-19781298,19782760-19783099 29 1.6 12_01_0338 - 2594680-2594796,2595079-2595147,2595233-2595338,259... 28 2.2 09_04_0350 + 16899076-16900164 28 2.2 04_04_0069 + 22506885-22508354 28 2.2 02_05_0011 + 24953472-24954506 28 2.2 01_06_1365 - 36690267-36692222 28 2.2 02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 2.9 01_06_0751 + 31690411-31690443,31692900-31694240 28 2.9 11_04_0438 - 17737040-17737122,17737373-17737496,17737897-177381... 27 3.8 02_02_0663 - 12740733-12741104,12741260-12741326,12741709-127418... 27 3.8 11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 27 5.0 05_01_0313 - 2461487-2461861,2461929-2462513,2462819-2464154,246... 27 5.0 03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 27 5.0 09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 27 6.6 07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 27 6.6 06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 27 6.6 06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 6.6 05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092,104... 27 6.6 09_04_0258 - 16175258-16176069,16176111-16176414 26 8.7 07_01_0516 - 3850252-3852870 26 8.7 03_02_0331 - 7527010-7529352 26 8.7 02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 26 8.7 02_02_0338 + 9105725-9106581,9106950-9107091 26 8.7 02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 26 8.7 01_01_0425 + 3221303-3222602,3222710-3222928,3223010-3223114,322... 26 8.7 >06_01_0410 + 2928382-2930973 Length = 863 Score = 32.3 bits (70), Expect = 0.13 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 8/44 (18%) Frame = -1 Query: 214 CLARDLGAFPPSR*PRTNVL--------SVCRACRPPTPTWRVA 107 CL+ DLG S P T + SVCRA PP P WRVA Sbjct: 350 CLSHDLGVNNLSLVPSTLEVPYHCFVLGSVCRASSPPVPLWRVA 393 >12_02_1125 - 26327433-26328239 Length = 268 Score = 31.9 bits (69), Expect = 0.18 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 313 EAAATGRPGTSSGCPAHVPGKGG 245 EA A G G S+ CP +PG+GG Sbjct: 64 EAVAAGSGGGSTACPVRLPGRGG 86 >08_02_0191 + 14041201-14043894,14044354-14044632 Length = 990 Score = 31.1 bits (67), Expect = 0.31 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 8/44 (18%) Frame = -1 Query: 214 CLARDLGAFPPSR*PRTNVL--------SVCRACRPPTPTWRVA 107 CL+ DLG S P T + SVCR PP P WRVA Sbjct: 349 CLSHDLGVNSLSLVPSTLEVPYHCFVLGSVCRVSSPPVPLWRVA 392 >04_04_0868 + 28874332-28875747 Length = 471 Score = 29.5 bits (63), Expect = 0.94 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -3 Query: 356 ATEPRLRILLLITDRSSSNRASGYFIGLPSPRSRERGVTDDPVLARR 216 A PRL +LLL+ + F G PSP S + V PV ARR Sbjct: 11 ARRPRLVVLLLVAFFALQLLVFLAFRGAPSPSSPDAAVDRVPVSARR 57 >03_04_0084 - 17153428-17153502,17154158-17154433 Length = 116 Score = 29.1 bits (62), Expect = 1.2 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +3 Query: 168 LGYLDGGN-APKSRARHTPS*YRIVCHPPFPGTWAGQPDEVPGRPVAAAS 314 LGYL GGN APK A+ P+ P P P E P A A+ Sbjct: 14 LGYLFGGNEAPKPAAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKADAT 63 >08_02_0661 - 19780036-19781002,19781244-19781298,19782760-19783099 Length = 453 Score = 28.7 bits (61), Expect = 1.6 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -2 Query: 231 CIS*ACVSLATWGHFHHLDSPGLTSCLFV--VRVAPPH--QHGEWPRPVNV 91 C S +C+ ++ GHF H T LF+ V APP HG+ + V V Sbjct: 155 CYSLSCLCVSDLGHFQHAREEDKTRILFLSFVDDAPPRPFHHGDVYQQVEV 205 >12_01_0338 - 2594680-2594796,2595079-2595147,2595233-2595338, 2596099-2596154,2596356-2596415,2596544-2596622, 2596870-2596964,2597085-2597198,2597642-2597693, 2598870-2599015 Length = 297 Score = 28.3 bits (60), Expect = 2.2 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -2 Query: 213 VSLATWGHFHHLDSPGLTSCLFVVRVAPPH-QHGEWPRPVNVCDSDADIGSCSSIHTA 43 ++LA HHL +P S + RV+P + ++PR V + + A C SI++A Sbjct: 1 MALAAAAAAHHLVAPAAVSPYYSARVSPGFLRLHDFPRSVGLAATAAPRIFCQSINSA 58 >09_04_0350 + 16899076-16900164 Length = 362 Score = 28.3 bits (60), Expect = 2.2 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 Query: 78 RHYRIR*PAGATRHVGVG 131 RH+RIR PA ATR V G Sbjct: 30 RHHRIRRPASATRRVAAG 47 >04_04_0069 + 22506885-22508354 Length = 489 Score = 28.3 bits (60), Expect = 2.2 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 Query: 78 RHYRIR*PAGATRHVGVG 131 RH+RIR PA ATR V G Sbjct: 41 RHHRIRRPASATRRVAAG 58 >02_05_0011 + 24953472-24954506 Length = 344 Score = 28.3 bits (60), Expect = 2.2 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -1 Query: 190 FPPS-R*PRTNVLSVCRACRPPTPTWRVAPAG*R 92 FPPS R RTN L CRA R W V+ G R Sbjct: 305 FPPSFRSKRTNHLIACRAVRNAGHPWIVSGGGAR 338 >01_06_1365 - 36690267-36692222 Length = 651 Score = 28.3 bits (60), Expect = 2.2 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = -2 Query: 276 AAQPTFQGKGGDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRP 100 AA T + RRSC +L W FH D + S +APPHQ P P Sbjct: 111 AAAGTARADEPQRRSCDVRGHSTL--WSLFHQDDRGRVPSSSSAADIAPPHQQPPPPPP 167 >02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771, 1982950-1983087 Length = 1228 Score = 27.9 bits (59), Expect = 2.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 20 IYISSRDAAVCIELHDPMSASLSHTLT 100 +Y+ +RDAA + + P+ A S+TLT Sbjct: 156 VYVLNRDAAARLTISSPLEAHKSNTLT 182 >01_06_0751 + 31690411-31690443,31692900-31694240 Length = 457 Score = 27.9 bits (59), Expect = 2.9 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 351 RAPASHPTSHYRQKQQQQGVRVLHRAAQPTFQGKGG 244 RA +H Q+QQ G + HR QP +G GG Sbjct: 69 RAQQAHEQLQIYQQQQGFGSFLQHRIRQPASRGPGG 104 >11_04_0438 - 17737040-17737122,17737373-17737496,17737897-17738182, 17738265-17738397,17738742-17738953,17739455-17739816, 17739907-17739937,17744738-17745111 Length = 534 Score = 27.5 bits (58), Expect = 3.8 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 Query: 345 PASHPTSHYRQKQQQQGVRVLHRAAQP 265 PAS P +H+R + + +GVR+ R +P Sbjct: 54 PASTPDTHHRSRIRVRGVRIGGRMCRP 80 >02_02_0663 - 12740733-12741104,12741260-12741326,12741709-12741809, 12741852-12742273,12743678-12743685,12745164-12745396 Length = 400 Score = 27.5 bits (58), Expect = 3.8 Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 3/76 (3%) Frame = +3 Query: 105 GATRHVGVGGRHARQTDRTLVLGYLDGGNAPKSRARHTPS*YRIVCHPPFPGTWAGQPDE 284 GAT G A T GY P R R P Y + PP+P +P Sbjct: 9 GATSDDDDDGAEATPTPGWAATGYASAAGPPPKRPRWEPPPY-LPPPPPYPIPQPARPRA 67 Query: 285 VPGRPVAAAS---VGN 323 P P + AS VGN Sbjct: 68 AP-PPASTASGSLVGN 82 >11_06_0197 + 21149453-21149630,21149930-21149996,21150142-21150244, 21150901-21150971,21151091-21151154,21151239-21151304, 21151416-21151463,21151544-21151606,21151680-21151736, 21151884-21151950,21151969-21152042,21152176-21152244, 21152323-21152414,21152782-21152860,21153233-21153398, 21153826-21153950,21154089-21154351,21154473-21154569, 21154659-21154820,21154904-21155008,21155935-21156180 Length = 753 Score = 27.1 bits (57), Expect = 5.0 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -2 Query: 375 KCSRSPSNRAPASHPTSHYRQKQQQQGVRVLHRA 274 K S P P HP S Q QQQ +V ++A Sbjct: 702 KSSSHPPRHRPPLHPQSFRNQAQQQSQAQVQYQA 735 >05_01_0313 - 2461487-2461861,2461929-2462513,2462819-2464154, 2464231-2464338,2464421-2464743 Length = 908 Score = 27.1 bits (57), Expect = 5.0 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -2 Query: 189 FHHLDSPGLTSCLFVVRVAPPHQHGE 112 FHH SP L FV R PP +HGE Sbjct: 429 FHH-SSPRLQ---FVTRAPPPQEHGE 450 >03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911, 4041115-4041203,4041481-4041563,4041645-4042233, 4042915-4043101 Length = 529 Score = 27.1 bits (57), Expect = 5.0 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Frame = -2 Query: 150 FVVRVAPPHQHGEWPRPVN--VCDSDADIGSCSSIHTAASRLDIYIYSFK 7 F+ + HQHG W + + D +G+ S+ AA DI F+ Sbjct: 335 FIAHLRRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFR 384 >09_04_0094 - 14552970-14553182,14553275-14553679,14553780-14553902, 14554156-14554367,14554486-14554514,14554661-14555166 Length = 495 Score = 26.6 bits (56), Expect = 6.6 Identities = 20/62 (32%), Positives = 23/62 (37%) Frame = -2 Query: 192 HFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVNVCDSDADIGSCSSIHTAASRLDIYIYS 13 H HHL P L S V PP P P S A G+ SS A D + Sbjct: 6 HHHHLLPPRLLS----VHPQPPRLRLRRPLPRRAAASGAAAGTSSSTAAAPPPTDAALQE 61 Query: 12 FK 7 F+ Sbjct: 62 FR 63 >07_03_0249 - 15816515-15816868,15817749-15817958,15818051-15818245, 15818318-15818393,15819982-15820021,15820155-15820283, 15820363-15820405 Length = 348 Score = 26.6 bits (56), Expect = 6.6 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -3 Query: 317 DRSSSNRASGYFIGLPSPRSRERGVTDDPVLARRVSRSR 201 DR S R+S Y G S R R R +DD R RSR Sbjct: 299 DRGSEYRSSSYRNGRDSERDRHRYRSDDMRKDRSRVRSR 337 >06_03_1318 - 29282562-29282566,29282727-29282810,29282913-29283380, 29283735-29283917,29284362-29284467,29284627-29284651, 29284736-29284855,29284920-29284997,29285646-29285774, 29285976-29285989,29286168-29287944,29288344-29288489, 29288921-29291029 Length = 1747 Score = 26.6 bits (56), Expect = 6.6 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -2 Query: 150 FVVRVAPPHQHGEWPRPVNVCDSDADIG-SCSSIHTAASRLDIY 22 FV +A + G+W V + +G SCSS+H + +D+Y Sbjct: 1000 FVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMY 1043 >06_03_0507 + 21603472-21603750,21604371-21604463,21605046-21605372, 21605588-21605863,21606095-21607114 Length = 664 Score = 26.6 bits (56), Expect = 6.6 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +3 Query: 99 PAGATRHVGVGGRHARQTDRTLVLGYLDGGNAP 197 PA VGV GRH + +L Y +G AP Sbjct: 364 PASYWISVGVRGRHPKTVPALAILSYGNGNAAP 396 >05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092, 1044376-1044473,1045622-1045729,1045748-1045800, 1046876-1047080 Length = 288 Score = 26.6 bits (56), Expect = 6.6 Identities = 12/37 (32%), Positives = 16/37 (43%) Frame = +2 Query: 14 LYIYISSRDAAVCIELHDPMSASLSHTLTGRGHSPCW 124 +Y S VC+ LHDP + T G G + W Sbjct: 219 VYRACSCSSGPVCVLLHDPSQSEAGWTSHGGGRTGNW 255 >09_04_0258 - 16175258-16176069,16176111-16176414 Length = 371 Score = 26.2 bits (55), Expect = 8.7 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 Query: 246 PPFPGTWAGQPDEVPGRPVAAASVGNEK*DAKPG 347 PP P AG P+ G +AAA+ G E KPG Sbjct: 235 PPPPHGGAGLPEVGGGAAIAAAATGEEA-VGKPG 267 >07_01_0516 - 3850252-3852870 Length = 872 Score = 26.2 bits (55), Expect = 8.7 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +2 Query: 50 CIELHDPMSASLSHTLTGRGHSPCWCGGAT 139 C +P S H L +G+SPC GG + Sbjct: 156 CARRGNPRLGSQVHALAVKGNSPCGGGGGS 185 >03_02_0331 - 7527010-7529352 Length = 780 Score = 26.2 bits (55), Expect = 8.7 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +3 Query: 162 LVLGYLDGGNAPKSRARHTPS*YRIVCHPPFPGTWAGQPDEVPGRPVAAAS 314 +V+G LD G P+ R+ + PP P W G D PG P ++ + Sbjct: 139 VVVGVLDTGVWPERRSLSDRN------LPPVPSRWRGGCDAGPGFPASSCN 183 >02_05_1276 + 35397948-35398298,35398937-35401738,35402085-35402306, 35402503-35402562,35402615-35402698,35402740-35402816, 35403147-35403363 Length = 1270 Score = 26.2 bits (55), Expect = 8.7 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -3 Query: 320 TDRSSSNRASGYFIGLPSPRSRERGVTDDPVLARRVSRS 204 T+ +SSN+AS GLP P +G + +LAR RS Sbjct: 237 TNDTSSNQASNTD-GLPKPNMTSKGSSSVVMLARPAIRS 274 >02_02_0338 + 9105725-9106581,9106950-9107091 Length = 332 Score = 26.2 bits (55), Expect = 8.7 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -2 Query: 360 PSNRAPASHPTSH-YRQKQQQQGVRVLHRAAQPTFQGKG--GDRRSCIS*ACVSLA 202 P+ P P +H YRQ+QQQQ + + G G G R C++ V LA Sbjct: 44 PTQARPLKPPPAHQYRQQQQQQPANRKRQYGRHRGGGGGCSGRRVCCLATGFVLLA 99 >02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 Length = 375 Score = 26.2 bits (55), Expect = 8.7 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +3 Query: 228 YRIVCHPPFPGTWAGQPDEVPG 293 YR+V H P G WA P +PG Sbjct: 31 YRLVLHDPVAGGWAALP-PLPG 51 >01_01_0425 + 3221303-3222602,3222710-3222928,3223010-3223114, 3223274-3223403,3223524-3224464,3224971-3225257 Length = 993 Score = 26.2 bits (55), Expect = 8.7 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -2 Query: 378 LKCSRSPSNRAPASHPTSHYRQKQQQQG 295 ++ +RSPS+ ++ P + RQKQ++ G Sbjct: 887 IEAARSPSSSRDSASPRTRTRQKQRRTG 914 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,797,411 Number of Sequences: 37544 Number of extensions: 330499 Number of successful extensions: 1089 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1089 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 624784784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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