Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0240
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL662896-1|CAI41453.1| 298|Homo sapiens novel protein protein. 31 0.94
BC113553-1|AAI13554.1| 982|Homo sapiens WD repeat domain 52 pro... 30 2.2
BC101582-1|AAI01583.1| 982|Homo sapiens WD repeat domain 52 pro... 30 2.2
AK056472-1|BAB71193.1| 982|Homo sapiens protein ( Homo sapiens ... 30 2.2
BC126438-1|AAI26439.1| 837|Homo sapiens sema domain, immunoglob... 29 3.8
BC110853-1|AAI10854.1| 837|Homo sapiens sema domain, immunoglob... 29 3.8
AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor... 29 3.8
AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2 (Dros... 29 3.8
AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein. 29 3.8
AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein. 29 3.8
AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein. 29 3.8
AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2 (Dros... 29 3.8
AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2 (Dros... 29 3.8
AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patche... 29 3.8
AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein. 29 3.8
AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein. 29 3.8
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 29 6.6
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 29 6.6
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 29 6.6
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 29 6.6
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 29 6.6
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 29 6.6
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 29 6.6
U88870-1|AAD00657.1| 459|Homo sapiens cell division control-rel... 28 8.7
U88829-1|AAD00653.1| 478|Homo sapiens cell division control-rel... 28 8.7
D89278-1|BAB46922.1| 478|Homo sapiens cerebral protein-7 protein. 28 8.7
CR457111-1|CAG33392.1| 478|Homo sapiens PNUTL2 protein. 28 8.7
BC018056-1|AAH18056.3| 459|Homo sapiens septin 4 protein. 28 8.7
AF176379-1|AAG45673.1| 274|Homo sapiens ARTS protein protein. 28 8.7
AF073312-1|AAC25673.1| 478|Homo sapiens peanut-like 2 protein. 28 8.7
AF035811-1|AAB88512.1| 478|Homo sapiens protein H5 protein. 28 8.7
AB008753-1|BAB70695.1| 478|Homo sapiens Bradeion beta protein. 28 8.7
AB002110-1|BAB70694.1| 208|Homo sapiens Bradeion alpha protein. 28 8.7
>AL662896-1|CAI41453.1| 298|Homo sapiens novel protein protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.94
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 132 PPHQHGEWPRPVNVCDSDADIGSCSSIH 49
P H WPRP+ + S + SCS++H
Sbjct: 218 PCHPMHNWPRPIPLSSSTPGLPSCSTVH 245
>BC113553-1|AAI13554.1| 982|Homo sapiens WD repeat domain 52
protein.
Length = 982
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 85 IAYVNRPGPLAMLVWGGDTHDKQT 156
I Y+N PGP+ L+W +H + T
Sbjct: 611 IGYINTPGPVCQLMWSPMSHPEST 634
>BC101582-1|AAI01583.1| 982|Homo sapiens WD repeat domain 52
protein.
Length = 982
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 85 IAYVNRPGPLAMLVWGGDTHDKQT 156
I Y+N PGP+ L+W +H + T
Sbjct: 611 IGYINTPGPVCQLMWSPMSHPEST 634
>AK056472-1|BAB71193.1| 982|Homo sapiens protein ( Homo sapiens
cDNA FLJ31910 fis, clone NT2RP7004687, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 982
Score = 30.3 bits (65), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 85 IAYVNRPGPLAMLVWGGDTHDKQT 156
I Y+N PGP+ L+W +H + T
Sbjct: 611 IGYINTPGPVCQLMWSPMSHPEST 634
>BC126438-1|AAI26439.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 211 LARDLGAFPPSR*PRTNVLSVCRACRPPTPTWRVAP 104
LA GA PP R P +L + +PP PTW ++P
Sbjct: 12 LAAPWGALPP-RPPLLLLLLLLLLLQPPPPTWALSP 46
>BC110853-1|AAI10854.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 211 LARDLGAFPPSR*PRTNVLSVCRACRPPTPTWRVAP 104
LA GA PP R P +L + +PP PTW ++P
Sbjct: 12 LAAPWGALPP-RPPLLLLLLLLLLLQPPPPTWALSP 46
>AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor
protein.
Length = 837
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 211 LARDLGAFPPSR*PRTNVLSVCRACRPPTPTWRVAP 104
LA GA PP R P +L + +PP PTW ++P
Sbjct: 12 LAAPWGALPP-RPPLLLLLLLLLLLQPPPPTWALSP 46
>AY438664-1|AAR05447.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AY359016-1|AAQ89375.1| 1203|Homo sapiens Patched 2 protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein.
Length = 1211
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein.
Length = 837
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 211 LARDLGAFPPSR*PRTNVLSVCRACRPPTPTWRVAP 104
LA GA PP R P +L + +PP PTW ++P
Sbjct: 12 LAAPWGALPP-RPPLLLLLLLLLLLQPPPPTWALSP 46
>AL592166-5|CAI13000.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AL136380-1|CAI23127.1| 1203|Homo sapiens patched homolog 2
(Drosophila) protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AF091501-1|AAC79847.1| 1203|Homo sapiens receptor protein patched 2
protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AF087651-1|AAD25953.1| 1203|Homo sapiens patched 2 protein.
Length = 1203
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 195 PKSRARHTPS*YRIVCHPPFPGTWA-GQPDEVPGRPVAAASVGN 323
P+S AR T S + PP PG + PDE P P AA S GN
Sbjct: 1150 PQSFARVTTSMTVAIHPPPLPGAYIHPAPDEPPWSP-AATSSGN 1192
>AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein.
Length = 893
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 211 LARDLGAFPPSR*PRTNVLSVCRACRPPTPTWRVAP 104
LA GA PP R P +L + +PP PTW ++P
Sbjct: 68 LAAPWGALPP-RPPLLLLLLLLLLLQPPPPTWALSP 102
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 423 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 457
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 754 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 788
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 754 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 788
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 592 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 626
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 754 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 788
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 754 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 788
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF S F P+ P SG
Sbjct: 754 KYEMFAQTLQQSRGFGS-FRFPSGNQGGAGPSQGSG 788
>U88870-1|AAD00657.1| 459|Homo sapiens cell division
control-related protein 2b protein.
Length = 459
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 28 CHPPEAKTWASRPQVPEPRPQA 49
>U88829-1|AAD00653.1| 478|Homo sapiens cell division
control-related 2a protein protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>D89278-1|BAB46922.1| 478|Homo sapiens cerebral protein-7 protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>CR457111-1|CAG33392.1| 478|Homo sapiens PNUTL2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>BC018056-1|AAH18056.3| 459|Homo sapiens septin 4 protein.
Length = 459
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 28 CHPPEAKTWASRPQVPEPRPQA 49
>AF176379-1|AAG45673.1| 274|Homo sapiens ARTS protein protein.
Length = 274
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 28 CHPPEAKTWASRPQVPEPRPQA 49
>AF073312-1|AAC25673.1| 478|Homo sapiens peanut-like 2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>AF035811-1|AAB88512.1| 478|Homo sapiens protein H5 protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>AB008753-1|BAB70695.1| 478|Homo sapiens Bradeion beta protein.
Length = 478
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
>AB002110-1|BAB70694.1| 208|Homo sapiens Bradeion alpha protein.
Length = 208
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 240 CHPPFPGTWAGQPDEVPGRPVA 305
CHPP TWA +P RP A
Sbjct: 47 CHPPEAKTWASRPQVPEPRPQA 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,123,174
Number of Sequences: 237096
Number of extensions: 1676418
Number of successful extensions: 4847
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4846
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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