Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0240
(382 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 38 0.003
Z72505-2|CAA96609.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.16
Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical pr... 32 0.16
Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical p... 32 0.16
DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein. 32 0.16
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 31 0.28
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 29 1.1
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 29 1.1
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 29 1.1
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 29 1.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 1.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 1.1
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 29 1.1
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 29 1.1
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 29 1.1
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 29 1.1
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 29 1.1
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 27 6.0
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 27 6.0
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 27 6.0
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.0
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.0
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 26 7.9
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 26 7.9
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 26 7.9
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 26 7.9
AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 li... 26 7.9
AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical ... 26 7.9
AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical... 26 7.9
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF + F P EA + G+P +G
Sbjct: 763 KYEMFAQTLQQSRGFGNNFKFPGEAPSAGQPVGGNG 798
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRPGTSSG 275
K EMFAQ QQS GF + F P EA + G+P +G
Sbjct: 763 KYEMFAQTLQQSRGFGNNFKFPGEAPSAGQPVGGNG 798
>Z72505-2|CAA96609.1| 340|Caenorhabditis elegans Hypothetical
protein C50C10.3 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 213 VSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPR 103
V+ A +G + L SP L S + +V + PH HG++ R
Sbjct: 115 VTFAYFGDYGTLSSPFLASLIRLVMILSPHNHGKYCR 151
>Z36282-4|CAI06055.2| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 WAGQPDEVPGRPVAAASVGNEK 329
W+ PD++PG P++AA G EK
Sbjct: 612 WSPNPDDLPGSPISAAYAGMEK 633
>Z31590-10|CAA83466.3| 801|Caenorhabditis elegans Hypothetical
protein R01H10.8 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 WAGQPDEVPGRPVAAASVGNEK 329
W+ PD++PG P++AA G EK
Sbjct: 612 WSPNPDDLPGSPISAAYAGMEK 633
>DQ104391-1|AAZ08414.1| 801|Caenorhabditis elegans CNK-1 protein.
Length = 801
Score = 31.9 bits (69), Expect = 0.16
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 264 WAGQPDEVPGRPVAAASVGNEK 329
W+ PD++PG P++AA G EK
Sbjct: 612 WSPNPDDLPGSPISAAYAGMEK 633
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 382 KLEMFAQP*QQSPGFASYFSLPTEAAATGRP 290
K EMFAQ QQS GF + F P E + P
Sbjct: 765 KYEMFAQTLQQSRGFGNNFKFPGEQRGSDAP 795
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 177 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 227
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 177 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 227
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 214 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 264
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 214 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 264
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 304 ATGRPGTSSGCPAHVPGKGG 245
ATGRPG CPA PG G
Sbjct: 124 ATGRPGFCITCPAGAPGPAG 143
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 304 ATGRPGTSSGCPAHVPGKGG 245
ATGRPG CPA PG G
Sbjct: 124 ATGRPGFCITCPAGAPGPAG 143
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 140 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 190
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 177 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 227
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 177 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 227
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 214 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 264
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 246 GDRRSCIS*ACVSLATWGHFHHLDSPGLTSCLFVVRVAPPHQHGEWPRPVN 94
GD R+ S +S + GH H SP + + PP++ P P N
Sbjct: 214 GDERASSSQPPMSPGSMGHLGHSSSPSMAGGATPMHYPPPYEPQSVPLPEN 264
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 20 IYISSRDAAVCIELHDPMSASLSHTLTGRGHSPCWCGGA 136
++ SSR C+ +++P R + CWC G+
Sbjct: 63 VHSSSRQVLACVRVNEPAEDGYCEYDAKRNVTKCWCTGS 101
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 20 IYISSRDAAVCIELHDPMSASLSHTLTGRGHSPCWCGGA 136
++ SSR C+ +++P R + CWC G+
Sbjct: 63 VHSSSRQVLACVRVNEPAEDGYCEYDAKRNVTKCWCTGS 101
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = +2
Query: 95 LTGRGHSPCWCGGATRTTNRQDVSPGLSRWWKCPQVASETH 217
++G SPC C G T+ + P + C Q H
Sbjct: 1929 ISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRH 1969
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = +2
Query: 95 LTGRGHSPCWCGGATRTTNRQDVSPGLSRWWKCPQVASETH 217
++G SPC C G T+ + P + C Q H
Sbjct: 1929 ISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRH 1969
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 381 SLKCSRSPSNRAPASHPTSHYRQKQQQQGVRVLHRAAQPTFQGKG 247
+L S +P+ + S SH+ Q+ QQQ + + P QG G
Sbjct: 327 ALMTSPAPTATSSTSSSASHHHQQHQQQLSQQQQQQQHPQQQGLG 371
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 381 SLKCSRSPSNRAPASHPTSHYRQKQQQQGVRVLHRAAQPTFQGKG 247
+L S +P+ + S SH+ Q+ QQQ + + P QG G
Sbjct: 327 ALMTSPAPTATSSTSSSASHHHQQHQQQLSQQQQQQQHPQQQGLG 371
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 381 SLKCSRSPSNRAPASHPTSHYRQKQQQQGVRVLHRAAQPTFQGKG 247
+L S +P+ + S SH+ Q+ QQQ + + P QG G
Sbjct: 327 ALMTSPAPTATSSTSSSASHHHQQHQQQLSQQQQQQQHPQQQGLG 371
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = +2
Query: 95 LTGRGHSPCWCGGATRTTNRQDVSPGLSRWWKCPQVASETH 217
++G SPC C G T+ + P + C Q H
Sbjct: 1929 ISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRH 1969
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/41 (26%), Positives = 16/41 (39%)
Frame = +2
Query: 95 LTGRGHSPCWCGGATRTTNRQDVSPGLSRWWKCPQVASETH 217
++G SPC C G T+ + P + C Q H
Sbjct: 1929 ISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRH 1969
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 86 SHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWK 190
S T+ RG+ PCW TNR D L W K
Sbjct: 50 STTVAVRGNLPCWEQEFIFETNRPDDGMVLELWAK 84
>AC084197-3|AAN63427.1| 173|Caenorhabditis elegans Histone h1 like
protein 2, isoformb protein.
Length = 173
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 192 APKSRARHTPS*YRIVCHPPFPG--TWAGQPDEVPGRPVAAASVGNEK 329
APKS+ P HPPF T A V +PVA + EK
Sbjct: 71 APKSKTTKEPKAKVAAAHPPFINMVTAAATKKPVAKKPVAKKAATGEK 118
>AC006722-6|AAK68411.2| 488|Caenorhabditis elegans Hypothetical
protein Y19D10A.11 protein.
Length = 488
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 242 TDDPVLARRVSRSRLGGIST 183
+DDP L R VS+ LG IST
Sbjct: 247 SDDPKLHRNVSQKELGKIST 266
>AC006645-11|AAF39850.1| 472|Caenorhabditis elegans Hypothetical
protein F56A4.12 protein.
Length = 472
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 242 TDDPVLARRVSRSRLGGIST 183
+DDP L R VS+ LG IST
Sbjct: 231 SDDPKLHRNVSQKELGKIST 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,658,274
Number of Sequences: 27780
Number of extensions: 229496
Number of successful extensions: 754
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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