Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0240
         (382 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   0.69 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.69 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   0.92 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   1.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   4.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   4.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   8.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    20   8.5  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 77  ASLSHTLTGRGHSPCWCGGATRTTNRQDVSPGLSRWWKCPQV 202
           +S S  L+    +  W G      N  D + G  R+W+ P V
Sbjct: 247 SSDSAVLSDEDQTKGWDGSNMVEGNESDHNDGRLRYWRTPSV 288


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 311 SSSNRASGYFIGLPSPRSRERGVTDDPVLAR 219
           +SS+ +S       SPRS ++ V D PVL R
Sbjct: 593 ASSSASSAPTSVCSSPRSEDKEVEDMPVLKR 623


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 369 SRSPSNRAPASHPTSHYRQKQQQQG 295
           S+ PS+ AP   P+ H   +  Q+G
Sbjct: 13  SQQPSSGAPGPQPSPHQSPQAPQRG 37


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/36 (22%), Positives = 21/36 (58%)
 Frame = -3

Query: 326 LITDRSSSNRASGYFIGLPSPRSRERGVTDDPVLAR 219
           ++ D+ ++   + YF+ +  PR+++ G +   V+ R
Sbjct: 408 ILGDKKTAEENTDYFMPIGRPRAKDYGHSSGSVIDR 443


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 331 YFSLPTEAAATGRPGTSSGCPAH 263
           Y  +P+EA     PG    CP +
Sbjct: 300 YLGIPSEARELQLPGCEVLCPLY 322


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 331 YFSLPTEAAATGRPGTSSGCPAH 263
           Y  +P+EA     PG    CP +
Sbjct: 315 YLGIPSEARELQLPGCEVLCPLY 337


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 189 NAPKSRARHTPS*YRIVC 242
           NAP      T + YR+VC
Sbjct: 339 NAPHMLGGRTDTTYRVVC 356


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 273 QPDEVPGRPVAAASVGNEK 329
           QP  + G PVA+ ++  E+
Sbjct: 581 QPQVISGNPVASVNMVGER 599


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 363 SPSNRAPASHPTSHYRQKQQQQGVRVLHR 277
           +PS R  AS    H    Q+++   V+HR
Sbjct: 154 NPSKRITASEALKHPWICQRERVASVVHR 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,029
Number of Sequences: 438
Number of extensions: 3015
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)