Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0239
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 1e-12
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 72 1e-11
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 72 1e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 70 7e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 54 4e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 43 0.009
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 39 0.11
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 39 0.15
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.33
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.0
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 35 1.8
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 34 3.1
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 34 4.1
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 7.2
UniRef50_UPI00015B9105 Cluster: UPI00015B9105 related cluster; n... 33 9.5
UniRef50_A5P5C9 Cluster: Thiamine-phosphate kinase; n=2; Alphapr... 33 9.5
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 510 VTGKTLALPNLIALQHIPLSPAGVIAKRPRTDRPFQQLRSLNGEWQI 650
VTGKTLALPNLIALQHIPLSPAGVI++ RTDRP QQLRSL +W++
Sbjct: 13 VTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSL--KWRM 57
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/48 (70%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFPTV--AQPEWRMA 646
RDWENPGVTQLNRLAAHPPFASWRNSEEA P + EWR A
Sbjct: 75 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/48 (70%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFPTV--AQPEWRMA 646
RDWENPGVTQLNRLAAHPPFASWRNSEEA P + EWR A
Sbjct: 33 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/48 (70%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFPTV--AQPEWRMA 646
RDWENPGVTQLNRLAAHPPFASWRNSEEA P + EWR A
Sbjct: 15 RDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 69.7 bits (163), Expect = 7e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEA 595
RDWENPGVTQLNRLAAHPPFASWRNSEEA
Sbjct: 29 RDWENPGVTQLNRLAAHPPFASWRNSEEA 57
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 54.0 bits (124), Expect = 4e-06
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
RDWENP +TQ +RL AHPPF SWR+ E A P P
Sbjct: 22 RDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSP 57
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFPTV--AQPEWRMA 646
DW+NP +T +NRL +H P WR+++ A P V EW+ +
Sbjct: 26 DWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSLDGEWQFS 72
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSP 610
DW N +T LNRL AHP FASWR+ A P
Sbjct: 22 DWHNQTITHLNRLPAHPVFASWRDELAARDNLP 54
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 39.1 bits (87), Expect = 0.11
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 57 VDELTAHLVLSGYWSP 104
VDELTAHLVLSGYWSP
Sbjct: 160 VDELTAHLVLSGYWSP 175
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +3
Query: 585 AKRPRTDRPFQQLRSLNGEWQIV 653
++ RTDRP QQLRSLNGEW+++
Sbjct: 50 SEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.5 bits (83), Expect = 0.33
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 430 KTRGGARYPIRPIVSRIT 483
+ RGGARYPIRPIVSRIT
Sbjct: 258 RPRGGARYPIRPIVSRIT 275
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.9 bits (79), Expect = 1.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 506 TRDWENPGVTQLNRLAAHPPFASWRNSEEA 595
+R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 2 SREWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 35.1 bits (77), Expect = 1.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 509 RDWENPGVTQLNRLAAHPPFASWRNSEEA 595
RDWENP Q+N++ AH P ++ E+A
Sbjct: 11 RDWENPITVQVNQVKAHSPLNGFKTIEDA 39
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 653 YNLPFAIQAAQLLERAIGAG 594
+ PFAIQAAQLL RAIGAG
Sbjct: 8 HQAPFAIQAAQLLGRAIGAG 27
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 473 VVLQFTGRRFTTR---DWENPGVTQLNRLAAHPPFASWRNSEEA 595
++ FTG T + DWENP V Q+NRL A S+ E+A
Sbjct: 17 LLFSFTGSAKTVQVKNDWENPDVIQINRLPARATSYSFDTPEQA 60
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 7.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 478 YDSL*GELGTGPPLE 434
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_UPI00015B9105 Cluster: UPI00015B9105 related cluster; n=1;
unknown|Rep: UPI00015B9105 UniRef100 entry - unknown
Length = 377
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 551 AAHPPFASWRNSEEAPHRSPFP 616
AA P ASWR +++AP RSP P
Sbjct: 355 AAPVPAASWRGAQDAPRRSPHP 376
>UniRef50_A5P5C9 Cluster: Thiamine-phosphate kinase; n=2;
Alphaproteobacteria|Rep: Thiamine-phosphate kinase -
Methylobacterium sp. 4-46
Length = 224
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 176 ATPPFKLKRITASRQK*AGRWYLPVG-ITRGPTPSKYRDRE 295
A PP +L I A + AG P+G +T GP P ++RDR+
Sbjct: 171 AVPPARLGAIRAEAEA-AGIPLTPIGTVTEGPAPPRFRDRD 210
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,607,710
Number of Sequences: 1657284
Number of extensions: 15666708
Number of successful extensions: 36030
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 34974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36017
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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