BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0239
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029528-1|AAH29528.1| 379|Homo sapiens sperm associated antige... 31 3.2
BC026118-1|AAH26118.1| 379|Homo sapiens sperm associated antige... 31 3.2
AL139826-2|CAI16148.1| 379|Homo sapiens sperm associated antige... 31 3.2
AL139826-1|CAI16147.1| 354|Homo sapiens sperm associated antige... 31 3.2
AL121756-4|CAI22528.1| 379|Homo sapiens sperm associated antige... 31 3.2
AL121756-3|CAI22529.1| 354|Homo sapiens sperm associated antige... 31 3.2
AF401350-1|AAM90665.1| 379|Homo sapiens testis and spermatogene... 31 3.2
>BC029528-1|AAH29528.1| 379|Homo sapiens sperm associated antigen
4-like protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 345 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 376
>BC026118-1|AAH26118.1| 379|Homo sapiens sperm associated antigen
4-like protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 345 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 376
>AL139826-2|CAI16148.1| 379|Homo sapiens sperm associated antigen
4-like protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 345 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 376
>AL139826-1|CAI16147.1| 354|Homo sapiens sperm associated antigen
4-like protein.
Length = 354
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 320 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 351
>AL121756-4|CAI22528.1| 379|Homo sapiens sperm associated antigen
4-like protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 345 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 376
>AL121756-3|CAI22529.1| 354|Homo sapiens sperm associated antigen
4-like protein.
Length = 354
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 320 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 351
>AF401350-1|AAM90665.1| 379|Homo sapiens testis and spermatogenesis
related gene 4 protein.
Length = 379
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 512 DWENPGVTQLNRLAAHPPFASWRNSEEAPHRSPFP 616
+W NPG T L R+ H A R E PH++P+P
Sbjct: 345 NWGNPGFTCLYRVRVHGSVAPPR---EQPHQNPYP 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,092,697
Number of Sequences: 237096
Number of extensions: 2536859
Number of successful extensions: 4370
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4370
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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