Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0237
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.19 
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    26   0.26 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    26   0.26 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   1.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.3  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 556 YSDVYSIEELAMNVNLPE 609
           Y D++  EE+A+ +NLPE
Sbjct: 93  YPDIFMREEVALKINLPE 110


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 553 YYSDVYSIEELAMNVNLPEVK 615
           +Y DV++ EELAM + L E +
Sbjct: 20  HYPDVFTREELAMKIGLTEAR 40



 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 509 TTYQLHELERAFEKS 553
           T+YQL ELE+AF ++
Sbjct: 5   TSYQLEELEKAFSRT 19


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 556 YSDVYSIEELAMNVNLPE 609
           Y D++  EE+A+ +NLPE
Sbjct: 151 YPDIFMREEVAVKINLPE 168


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 1   PDERFFADRSPDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLN 150
           P + +   +       N PR           +N+TDQS+  +Q    TLN
Sbjct: 17  PPQPYMNAQDAPAGGENEPRKQDIGEILQQIMNITDQSLDEAQARKHTLN 66


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 509 TTYQLHELERAFEKS 553
           T +QL ELE+AFE++
Sbjct: 228 TAHQLDELEKAFERT 242



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 556 YSDVYSIEELAMNVNLPEVK 615
           Y D+Y+ EELA    L E +
Sbjct: 244 YPDIYTREELAQRTKLTEAR 263


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 268 RSSASALRGRPDSVSSSRGERSATPSPSPR 357
           +SSA   +   +   S   ++SATPSP P+
Sbjct: 205 KSSAKRKQLVSEHPDSPNSKKSATPSPPPQ 234


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 336  DPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPP 437
            D V   P A++SA +GS +S++G   +     PP
Sbjct: 1081 DGVIPDPVALKSAQQGSSSSSEGVPLKGTAVPPP 1114


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 579 FYGVHV*IVLFS 544
           FYGVH  ++LFS
Sbjct: 266 FYGVHTLLILFS 277


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 99  RDRPVDIPVAAELGDS-QPHGHVLSRATNAI 188
           +D+   I +  E+ ++ QP GH+L+ A +AI
Sbjct: 151 KDKENFITLLREIKEAFQPKGHLLTIAVSAI 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,591
Number of Sequences: 336
Number of extensions: 3267
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)