Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0237
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05) 33 0.22
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 33 0.29
SB_47760| Best HMM Match : DUF1168 (HMM E-Value=2.1) 32 0.39
SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18) 32 0.51
SB_3278| Best HMM Match : ORC2 (HMM E-Value=0) 32 0.51
SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_1024| Best HMM Match : Ank (HMM E-Value=0) 31 1.2
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 29 2.7
SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 29 3.6
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 29 3.6
SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 29 3.6
SB_57163| Best HMM Match : 3HCDH_N (HMM E-Value=2.4) 29 4.8
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 4.8
SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9) 28 6.3
SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 6.3
SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 28 8.4
SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 28 8.4
SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) 28 8.4
>SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 470 GQQEETQKKLNHITTYQLHELERAFEKS 553
G+ + ++ TTYQLH+LERAFEK+
Sbjct: 87 GKPRKVRRSRTTFTTYQLHQLERAFEKT 114
>SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Frame = +2
Query: 479 EETQKKLNH----ITTYQLHELERAFEKS 553
+ ++KKL TT+QLHELERAFEKS
Sbjct: 79 DSSKKKLRRNRTTFTTFQLHELERAFEKS 107
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 547 EEYYSDVYSIEELAMNVNLPEVK 615
+ +Y DVY+ EELA+ ++LPEV+
Sbjct: 106 KSHYPDVYTREELALKISLPEVR 128
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 33.5 bits (73), Expect = 0.17
Identities = 36/114 (31%), Positives = 53/114 (46%)
Frame = +1
Query: 31 PDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDVK 210
P S ++S ++ S+P+S+SS SIS S + T + G ++ +
Sbjct: 445 PQSSTSSSSSNSQSSPSSSSSTTSATISISKSSADKST-RKQGHGKGTNNKRMIPQSSTE 503
Query: 211 RLGLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKA 372
L VPG SQ S+ T SS+S L+ P S SS+ SAT S S K+
Sbjct: 504 SQVLISVPG-SQPQSS--TSSSSSNLQSSPSSSSST---TSATISISKSSADKS 551
>SB_44342| Best HMM Match : Tctex-1 (HMM E-Value=1.7e-05)
Length = 608
Score = 33.1 bits (72), Expect = 0.22
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 67 VSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQM--QLN-QSFDVKRLGLTQVPG 237
+S+ N+N S + + S + ++ET R+GM F QM +N +++ +K + G
Sbjct: 157 ISSDNNNCSC-LDEHKASPTIMDVETWGRLGMDFLLVQMLDTVNAKAYSLKPVKAKSSKG 215
Query: 238 ASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPS 345
S+ PS +R S G+ SSR RS +PS
Sbjct: 216 RSRSPSKSPSRKS-----GKKSGKKSSRKSRSPSPS 246
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 226 QVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALAR 381
Q G +Q PS +S +S P S S G + A PSPSP+ P+ ++ +
Sbjct: 732 QGQGKNQMPSPATPQSMSSEKPSYPQSPKPSTG-KGAVPSPSPQRPASSMGK 782
>SB_47760| Best HMM Match : DUF1168 (HMM E-Value=2.1)
Length = 438
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 330 ECDPVPVSPGAVESAGEGSCNSNDG-YNQRTD-DKSPPGSDDDTP 458
E +P P++P A G +S +G N + D+SP GS+DD P
Sbjct: 274 ETEPSPITPEDESMASTGEISSEEGRVNPLFEPDRSPNGSEDDLP 318
>SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18)
Length = 530
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 SPGAVESAGEGSCNSNDGYNQRTDDK-SPPGSDDDTPQQSTDNKKKHRRN*TTLQPTS 521
SP ++ S N + TDD SP G+DD TD+ H T PTS
Sbjct: 454 SPSGTDNTDSPSGTDNTDSHTGTDDTDSPTGTDDTDSPTGTDDTDSHTGTDNTDSPTS 511
>SB_3278| Best HMM Match : ORC2 (HMM E-Value=0)
Length = 459
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +3
Query: 294 QARLSEF*QRREECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTD 473
Q +L + QRR P P+ P + +S + S+ ++ T+D + G+DDD ++ +
Sbjct: 37 QHKLRDTRQRRLPPRPQPIKPASKDS--DDDTGSHTSGHENTEDDTDDGNDDDN-KEGSS 93
Query: 474 NKKKHRRN*TTLQPTSFMSWSA 539
K N + P + + SA
Sbjct: 94 GKDDESENEKIIVPKALGNESA 115
>SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 366 ESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKKKHRRN 497
+++G+G+ NS DG R DD G +D DN + N
Sbjct: 56 DNSGDGNDNSGDGNCNRDDDNDNSGDGNDNSGDGNDNSGDGKDN 99
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 366 ESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNK 479
+++G+G+ NS DG + R D ++D S DN+
Sbjct: 84 DNSGDGNDNSGDGKDNRDDGNDNKDDENDNTGDSNDNR 121
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 366 ESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDN 476
+++G+G N +DG + + D+ G +D DN
Sbjct: 91 DNSGDGKDNRDDGNDNKDDENDNTGDSNDNRDDGNDN 127
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 366 ESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNK 479
+++G+G+CN +D + D G +D DN+
Sbjct: 63 DNSGDGNCNRDDDNDNSGDGNDNSGDGNDNSGDGKDNR 100
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Frame = +1
Query: 40 SDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQ-SFDVKRL 216
S TN+ + STP + S+ + S S + + + S R
Sbjct: 30 STTNTSAPSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRAGSTTTTSAPSTSTPRT 89
Query: 217 GLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALARVRVTV 396
G T A PST R+ ++ P + ++S A + +PR S R T
Sbjct: 90 GSTTTTSA---PSTSTPRTGSTTTTSAPSTSTTSNSTTRAPSTSTPRTGSTITLRTSTTS 146
Query: 397 MMATT 411
+M TT
Sbjct: 147 VMTTT 151
>SB_1024| Best HMM Match : Ank (HMM E-Value=0)
Length = 891
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 295 RPDSVSSSRGERSATPSPSPREPSKALARVRVTVMMATTRELMTSRH 435
R + S + S TPSP P++PSK R + R + ++RH
Sbjct: 784 RREQPKSEKTPPSTTPSPPPKQPSKPTESRRAKSGVFGRRSISSARH 830
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 390 NSNDGYNQRTDDKSPPGSDDDTPQQSTDNKKKHRR 494
N+ND +++ DDK +DD + D KKH+R
Sbjct: 125 NTNDDNDKKNDDKDKNTNDDFDDNTTDDIDKKHQR 159
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 390 NSNDGYNQRTDDKSPPGSDDDTPQQSTDNKK 482
N+ND N+ T+D + ++DD +++ D K
Sbjct: 109 NNNDDSNENTNDDNDKNTNDDNDKKNDDKDK 139
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +3
Query: 402 GYNQRTDDKSPPGSDDDTPQQSTDNK----KKHRRN 497
G RT SPP SDD+ P Q K KKH++N
Sbjct: 79 GCAPRTPSPSPPPSDDEGPAQKKAKKLKKNKKHKKN 114
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +3
Query: 252 KHSIDAILGLSSQRQARLSEF*QR--REECDPVPVSPGAVESAGEGSCNSNDGYNQRTDD 425
+H+I + + +SS ++ R R ++ C PVP + ++AG S SND + DD
Sbjct: 138 QHAIQSQI-ISSDKKGRKKAKKVRLIKKACQPVPGNLSN-DNAGTESGESNDDDDDGDDD 195
Query: 426 KSPPGSDDDTPQQSTD 473
DDD ++ D
Sbjct: 196 DDDDDDDDDGVEEEED 211
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 330 ECDPVPVSPGAVESAGEGSCNSNDG 404
ECDP PG+V AG G C G
Sbjct: 613 ECDPFGTLPGSVCDAGSGQCRCKAG 637
>SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 363 VESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKKKHRRN*TTLQP 515
++ A + N+ND TDD+ G D+D +T+ K+K RRN TT P
Sbjct: 76 MDEAADSDTNANDA---STDDER--GKDEDP---ATNQKRKLRRNRTTFTP 118
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +3
Query: 366 ESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQST----DNKKKHRRN 497
+ +GEG+ NSN + DD G DD+ S DNK++ N
Sbjct: 306 DGSGEGNKNSNSDDTEENDDDIEEGRTDDSKDDSVKFGEDNKERPDAN 353
>SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 390 NSNDGYNQRTDDKSPPGSDDDTPQQSTDNKKKHRRN 497
N ND N DD DDD DN + N
Sbjct: 16 NDNDNDNDNDDDDDDDDDDDDDDDDDDDNNNNNNNN 51
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 538 ALQLMKLVGCNVVQFLLCFFLLSVDCC 458
A ++M+ VGC V+ + CF + V CC
Sbjct: 5 ACRVMRCVGCRVMCCVACFVMHCVACC 31
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 538 ALQLMKLVGCNVVQFLLCFFLLSVDCCGVS 449
A ++M+ V C V++ + C + VDCC V+
Sbjct: 61 ACRVMRCVACCVMRCVACCVMRCVDCCVVT 90
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 538 ALQLMKLVGCNVVQFLLCFFLLSVDCC 458
A ++M+ VGC V+ + CF + V CC
Sbjct: 13 ACRVMRCVGCRVMCCVACFVMHCVACC 39
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 538 ALQLMKLVGCNVVQFLLCFFLLSVDCCGVS 449
A ++M+ V C V++ + C + VDCC V+
Sbjct: 141 ACRVMRCVACCVMRCVACCVMRCVDCCVVT 170
>SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 544 REEYYSDVYSIEELAMNVNLPE 609
+E +Y DVY+ E L++ ++LPE
Sbjct: 116 KESHYPDVYARENLSLKIDLPE 137
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 298 PDSVSSSRGERSATPSPSPREPSKALARVRVTVMMATTRELMTS 429
PD+V S TP+PS EP++ R T +A TS
Sbjct: 10 PDTVERKSSTSSTTPTPSEMEPAEKRNRSETTESLADDESGSTS 53
>SB_57163| Best HMM Match : 3HCDH_N (HMM E-Value=2.4)
Length = 303
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -1
Query: 127 ATGISTG--RSRLLRSWSWAC*RPSGGCW 47
ATG S R R + W W C R +G CW
Sbjct: 219 ATGASRAVYRRRNGKRWRWVCRRRNGKCW 247
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 241 SQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALARVRVTVMMATTREL 420
S+ PST T+ S +L P S+ S SPS ++PS AL + TT L
Sbjct: 142 SRQPSTA-TQVSGPSL---PMQHSTEHHSTSGVASPSTKQPSTALTTTKQPTTQQTTTNL 197
Query: 421 MTSR 432
++R
Sbjct: 198 PSTR 201
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 232 PGASQGPSTV*TRSSASALRGRPDSVSSSR-GERSATPSPSPREPSKALAR 381
P AS+ P T ++ RP S SSR RS +P+PSPR +AR
Sbjct: 470 PRASRRPPGESTLVTSQP-NSRPSSRPSSRPNSRSPSPTPSPRLDDSEIAR 519
>SB_15644| Best HMM Match : Vicilin_N (HMM E-Value=4.9)
Length = 212
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 363 VESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKKKHRR 494
+E GE +S D + DD S P S D+P+ + D K+ +
Sbjct: 133 LERVGEAGSSSMD---DKPDDSSSPSSSSDSPKGTLDPKETQEK 173
>SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 333 CDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTP 458
CD + G E A G ++ D TDD +P G D+D P
Sbjct: 325 CDKDDAALGDTEDAAPG--DTEDAAPGDTDDAAPGGIDEDAP 364
>SB_34820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 336 DPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDN 476
D + G+ +G G+ N DG + DD G DD + D+
Sbjct: 32 DGIDDGDGSGCGSGRGNDNDGDGVDNDNDDNDCGGDGDDDEDEGVDD 78
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 DRSPDRSDTNSPRSAVS-TPNSNSSINVTDQS--ISLSQQNLETLN 150
D PD S+TN+ S S T NSNS + +D S +L+ N T N
Sbjct: 142 DSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDN 187
>SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2103
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 268 RSSASALRGRPDSVSSSRGERSATPSPSPREPS 366
R A R + + SS GE S +P+P PR+ S
Sbjct: 388 RRKTEAERANKEYLLSSSGETSISPTPPPRKQS 420
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +3
Query: 345 PVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDN 476
P+ + +G C+ NDG DD DD +Q N
Sbjct: 282 PLGTSCDDGGDDGGCDDNDGDGSGCDDGGDSSGCDDDGEQLAGN 325
>SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 501 FNFFCVSSCCPWTAVACRRR 442
+ FFCVS+C P+ + C R
Sbjct: 712 YAFFCVSACDPYALIICEGR 731
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 289 RGRPDSVSSSRGER-SATPSPSPREPSKA 372
R R DS S SR R S TPSP PR K+
Sbjct: 897 RRRRDSYSPSRRRRDSPTPSPPPRRRRKS 925
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 220 LTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALARV 384
L ++P GPS T SS+ RP+ +S RS+TP+ S K ++
Sbjct: 506 LGKIPRKCAGPSVCQTASSSDVANNRPEYIS-----RSSTPTKSETNIGKKSEKI 555
>SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22)
Length = 884
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 375 GEGSCNSNDGYNQRTDDKSPPGSDDDTPQ-QSTDNKKKHRRN*TTLQPTSFMSWSAPS 545
G+G+ D NQ D + +DDD P QS +K + T+ T+++ AP+
Sbjct: 738 GDGAPEDEDHNNQSIDGDAVDDNDDDVPSIQSEVSKLEKTLKCTSKGSTAYLVPDAPA 795
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,104,941
Number of Sequences: 59808
Number of extensions: 442046
Number of successful extensions: 2688
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2627
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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