Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0237
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    26   1.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.0  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    24   5.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.0  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   7.0  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    23   9.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.2  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 7/29 (24%), Positives = 20/29 (68%)
 Frame = -1

Query: 550 LLEGALQLMKLVGCNVVQFLLCFFLLSVD 464
           +++GA+  ++++GC  +  LLC  ++ ++
Sbjct: 305 IVDGAVNDVRIIGCITIVLLLCIVVVGME 333


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 VPVSPGAVESAGEGSCNSNDG 404
           VP  PGA   AG   CN  DG
Sbjct: 167 VPGVPGAPGLAGRDGCNGTDG 187


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +1

Query: 187  LNQSFDVKRLGLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPR 357
            L Q +D  R  L +        +     +  ++L    ++    RG R  TPSP PR
Sbjct: 1077 LQQDWDETRRELAEQGAPRVADNQHNQDNDRTSLYSARNTSEEQRGRRHPTPSPPPR 1133


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 486 VSSCCPWTAVACRRRYPVATCHQFSGCSHHY 394
           +++ CP  A++   R P +TC + SG    Y
Sbjct: 275 LTNLCPAVALSYGGRKPSSTCSKASGTGQVY 305


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 586 PALLWSTRLNSTLLEGALQLMKLVGCNVVQFLLCFF 479
           P ++W  +++ST L+ ++   +L   N + F  CFF
Sbjct: 766 PQIVWFWQVSSTDLQLSMSEDRLHVFNWLPFASCFF 801


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +3

Query: 348  VSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDD 452
            VS       G G     DG ++  DD    G +DD
Sbjct: 1709 VSGSGGGGGGGGGGGEEDGSDKEEDDDDDDGEEDD 1743


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 119 PCRSRTWRLSTAWA 160
           PCR   WRLST+ A
Sbjct: 51  PCRVPGWRLSTSGA 64


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 322  GERSATPSPSPREPSKALARVRVTVMMATTRELMTSRHR 438
            GER + PS SPR   +   R  +   MA  R+    RHR
Sbjct: 1071 GERPSMPSSSPRTSER---RANIRARMARLRQ----RHR 1102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,473
Number of Sequences: 2352
Number of extensions: 13813
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)