Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0237
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 36 0.021
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical pr... 35 0.049
AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein sp... 35 0.049
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 31 0.79
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 31 1.0
L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.4
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 29 3.2
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 29 4.2
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 29 4.2
U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical p... 29 4.2
U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical p... 29 4.2
U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical p... 29 4.2
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 29 4.2
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 4.2
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 29 4.2
Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 28 5.6
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 5.6
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 28 5.6
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 28 5.6
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 5.6
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 5.6
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 27 9.8
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 9.8
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 27 9.8
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 27 9.8
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 291 RQARLSEF*QRREECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQST 470
R + +E E D + VSPG +S G G +D + D GSDD+ +
Sbjct: 343 RNNKKTEVNANEERLDDLSVSPGRSDSPGGGGGGHSDSFQDPMDPGEQLGSDDEEQEDPR 402
Query: 471 DNKK 482
D K+
Sbjct: 403 DYKR 406
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 327 EECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKK 482
E D + VSPG +S G G +D + D GSDD+ + D K+
Sbjct: 67 ERLDDLSVSPGRSDSPGGGGGGHSDSFQDPMDPGEQLGSDDEEQEDPRDYKR 118
>Z19152-5|CAA79541.1| 698|Caenorhabditis elegans Hypothetical
protein B0464.5b protein.
Length = 698
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 327 EECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKK 482
E D + VSPG +S G G +D + D GSDD+ + D K+
Sbjct: 67 ERLDDLSVSPGRSDSPGGGGGGHSDSFQDPMDPGEQLGSDDEEQEDPRDYKR 118
>AF241656-1|AAG36873.1| 698|Caenorhabditis elegans SR protein
specfic kinase SPK-1 protein.
Length = 698
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 327 EECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQSTDNKK 482
E D + VSPG +S G G +D + D GSDD+ + D K+
Sbjct: 67 ERLDDLSVSPGRSDSPGGGGGGHSDSFQDPMDPGEQLGSDDEEQEDPRDYKR 118
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 31.1 bits (67), Expect = 0.79
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 268 RSSASALRGR---PDSVSS--SRGERSATPSPSPREPSKALARVRVTVMMATTRELMT 426
RS+ +ALRG P ++SS +RGE ++ SP+P E S + A + + TT LMT
Sbjct: 245 RSNTNALRGTVSIPSALSSMMNRGESTSRFSPNPSERSWSNAGIDESSPTPTTSLLMT 302
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +3
Query: 264 DAILGLSSQRQARLSEF*QRREECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGS 443
+A G+S +R AR +R+ EC V GA G NDG + ++ + PG
Sbjct: 87 EAHRGMSKRRVARRKAIRRRQAECCSCGV--GAAGPQGPPGRPGNDGNDGQSGNPGSPGQ 144
Query: 444 DDDTPQQSTDNKK 482
D + N++
Sbjct: 145 DGSDSYEHQQNRE 157
>L14710-5|AAK84538.1| 277|Caenorhabditis elegans Hypothetical
protein K02D10.5 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 16 FADRSPDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQ 195
F+ S R+ T S RSA+ + N D+++ + NL L R+G + N+
Sbjct: 156 FSGPSGQRTLTESSRSAIKGTRWEAMDNQIDENLDMMSANLRNLQRLGADLGKEVDSQNE 215
Query: 196 SFD 204
D
Sbjct: 216 MLD 218
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 76 PNSNSSINVTDQSISLSQ-QNLETLNRMGMFFHAQQMQLNQSFDVKRLGLTQVPGASQGP 252
P S+S +V S S S QN+E + +F +Q + + P P
Sbjct: 1577 PQSSSVASVKPPSNSSSVGQNIEVT--VPSYFPVEQSKSVTQAPIPPASSPSAPSIPSIP 1634
Query: 253 STV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPS 366
ST+ S+S++ P + S S S TP+P P+
Sbjct: 1635 STLPVAPSSSSVPSSPSAPSESTSTVSETPAPVNVNPA 1672
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 351 SPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQST 470
S GAV+ GEG C + G + +D ++D + ST
Sbjct: 481 SSGAVDECGEGLCEEDCGCDDYDEDDEDEVDEEDKEETST 520
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 405 YNQRTDDKSPPGSDDDTPQQSTDNKKKHRRN*TTLQPTSFMSWSAPS 545
YN+R D +S S +P++S +KK RRN + + M S S
Sbjct: 92 YNKRRDKRSRSRSRHRSPKRSGSSKKSKRRNSSGSSSSDLMDTSLMS 138
>U41533-8|AAA83171.2| 588|Caenorhabditis elegans Hypothetical
protein R05F9.1b protein.
Length = 588
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 217 GLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALAR 381
GL +VP S S+ SAS R S+ RG S++ SP PS++ AR
Sbjct: 109 GLKKVPAYSATSSSSQAGPSASTSTARKSSLVGGRGSASSSGHTSP-SPSESPAR 162
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 ERFFADRSPDRSDTNSPR-SAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQM 183
+R A ++ +++ + R S STP +S+ + D + ++ Q + L AQQ
Sbjct: 314 QRAAAQQAQAQNNASQQRPSGASTPGLSSTPQLNDLTQTMQAQLQQQLLLQQQQAQAQQA 373
Query: 184 QLNQSFDVKRLGLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREP 363
Q Q + + Q G SQ + +++ + + + G +P P
Sbjct: 374 QQAQQAQLAQQAQQQQQGQSQNRTVSQALQYIQSMQLQQRADGTPNGSTRTSPGPKDSRM 433
Query: 364 SKALARVRVTVMMATTRELMTS 429
+A +R + ++ ++ M S
Sbjct: 434 LQAASRSQSLFELSGSKHFMGS 455
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 28 SPDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHA 174
+P RS SP+ STP+S++S + T S S S L + R FHA
Sbjct: 111 NPKRSPRWSPQPDPSTPSSSTS-SSTSSSPSSSSTPLTSTQRRSPRFHA 158
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 535 ARLREEYYSDVYSIEELAMNVNLPEVK 615
A + +Y DVY+ E LA V LPEV+
Sbjct: 77 AAFDKTHYPDVYARETLAAKVQLPEVR 103
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 336 DPVPVSPGAVESAGEGSCNSNDGYNQRT--DDKSPPGSDDDTPQQSTDNKKK 485
D PV+P A + +G D +++ D+K D+D + D +KK
Sbjct: 53 DAPPVAPDAAAAPADGEKKDGDKKSEKKEGDEKKEEKKDEDKKDEKKDEEKK 104
>U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical
protein F42G9.6c protein.
Length = 659
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 220 LTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPS 366
L+ VP S P + T SAL R +S +S A+P+P R P+
Sbjct: 535 LSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNPN 583
>U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical
protein F42G9.6b protein.
Length = 683
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 220 LTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPS 366
L+ VP S P + T SAL R +S +S A+P+P R P+
Sbjct: 559 LSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNPN 607
>U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical
protein F42G9.6a protein.
Length = 657
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 220 LTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPS 366
L+ VP S P + T SAL R +S +S A+P+P R P+
Sbjct: 533 LSGVPRISASPDSPTTPDIESALLTRRNSYGASDPTSEASPTPPQRNPN 581
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 547 EEYYSDVYSIEELAMNVNLPEVK 615
E +Y D+Y+ EE+AM ++L E +
Sbjct: 170 ETHYPDIYTREEIAMRIDLTEAR 192
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +1
Query: 223 TQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREPSKALARVRVTVMM 402
T P GPS S + G P + + G+ + P P+ R A+ R RV V
Sbjct: 230 TPGPQGPPGPSGQPGHSGNDGVPGTPGNPGAPGGDAAYCPCPA-RSSVMAVNR-RVAVNR 287
Query: 403 ATTRELMTSRHRVA 444
R + RHR+A
Sbjct: 288 NVARNRVVVRHRIA 301
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 547 EEYYSDVYSIEELAMNVNLPEVK 615
E +Y D+Y+ EE+AM ++L E +
Sbjct: 170 ETHYPDIYTREEIAMRIDLTEAR 192
>Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical
protein F16D3.2 protein.
Length = 689
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 286 LRGRPDSVSSSRGERSATPSPSPR 357
+RGRPDS G+R +T SPR
Sbjct: 223 IRGRPDSRDGYNGDRDSTRYSSPR 246
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 28.3 bits (60), Expect = 5.6
Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 ERFFADRSPDRSDTNSPRSAV-STPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQM 183
+R A ++ +++ + R +V STP +S+ + D + ++ Q + L AQQ
Sbjct: 314 QRAAAQQAQAQNNASQQRPSVASTPALSSTPQLNDLTQTMQAQLQQQLLLQQQQAQAQQA 373
Query: 184 QLNQSFDVKRLGLTQVPGASQGPSTV*TRSSASALRGRPDSVSSSRGERSATPSPSPREP 363
Q Q + + Q G SQ + +++ + + + G +P P
Sbjct: 374 QQAQQAQLAQQAQQQQQGQSQNRTVSQALQYIQSMQLQQRADGTPNGSTRTSPGPKDSRM 433
Query: 364 SKALARVRVTVMMATTRELMTS 429
+A +R + ++ ++ M S
Sbjct: 434 LQAASRSQSLFELSGSKHFMGS 455
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 477 CCP-WTAVACR-RRYPVATCHQFSGCSHHYCY 388
C P WT AC R P A+CH C + CY
Sbjct: 400 CNPGWTGEACELRACPHASCHDRGVCVNGTCY 431
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 28.3 bits (60), Expect = 5.6
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +1
Query: 28 SPDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDV 207
S D +D + R + T + ++ T + ++ E+ N + + F A +
Sbjct: 871 SEDAADIRAGRLPLGTRPNRRTVRETVHPAAAARA--ESPNHISLTFTATTHTFAPAGFP 928
Query: 208 KRLGLTQVPGASQGPSTV*TRSSAS---ALRGRPDSVSSSRGERSATPSPSPREPSKALA 378
+ + VP S GP R S RG + S ++ A +PSP P+
Sbjct: 929 LMMASSNVPSTSAGPPGWPIRQVVSPTPTTRGLFEFDLSGSSDQPARSTPSPPAPTPRTT 988
Query: 379 RVRVTVMMATTRE 417
TV + TR+
Sbjct: 989 SAPATVQSSPTRQ 1001
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 28.3 bits (60), Expect = 5.6
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Frame = +1
Query: 28 SPDRSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDV 207
S D +D + R + T + ++ T + ++ E+ N + + F A +
Sbjct: 871 SEDAADIRAGRLPLGTRPNRRTVRETVHPAAAARA--ESPNHISLTFTATTHTFAPAGFP 928
Query: 208 KRLGLTQVPGASQGPSTV*TRSSAS---ALRGRPDSVSSSRGERSATPSPSPREPSKALA 378
+ + VP S GP R S RG + S ++ A +PSP P+
Sbjct: 929 LMMASSNVPSTSAGPPGWPIRQVVSPTPTTRGLFEFDLSGSSDQPARSTPSPPAPTPRTT 988
Query: 379 RVRVTVMMATTRE 417
TV + TR+
Sbjct: 989 SAPATVQSSPTRQ 1001
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 477 CCP-WTAVACR-RRYPVATCHQFSGCSHHYCY 388
C P WT AC R P A+CH C + CY
Sbjct: 342 CNPGWTGEACELRACPHASCHDRGVCVNGTCY 373
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -2
Query: 477 CCP-WTAVACR-RRYPVATCHQFSGCSHHYCY 388
C P WT AC R P A+CH C + CY
Sbjct: 524 CNPGWTGEACELRACPHASCHDRGVCVNGTCY 555
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 37 RSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDVKRL 216
R T + + S P+S SS S++ ETL+R+G + FDVKR+
Sbjct: 44 RGSTCTSSATSSAPSSTSSTRARRNWSVFSERLRETLSRVGGGGPSSTTDSLILFDVKRV 103
Query: 217 G 219
G
Sbjct: 104 G 104
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 336 DPVPVSPGAVESAGEGSCNSND-GYNQRTDDKSPPGSDDDTPQ 461
D P +PG G ++N QR DD++PP S PQ
Sbjct: 252 DAFPGTPGQAGKPGAPGKDANYCPCPQRQDDRTPPSSGTSAPQ 294
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 85 NSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDVKRLGLTQVPGASQGPSTV* 264
N +V +Q++ + QQ E +NR + ++ + + + VP S S
Sbjct: 57 NEVASVKNQAMRIVQQKFEEMNR-------DKKDMSTETEPSLMAHSSVP-LSNSKSERR 108
Query: 265 TRSSASA--LRGRPDSVSSSRGERSATPSPSPREPSKALA 378
RSS+ + R VSSS G S P P +PS L+
Sbjct: 109 ARSSSPGHVIAQRKTMVSSSSGTFSPPPLDPPFDPSSKLS 148
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 604 AG*HS*PALLWSTRLNSTLLEGALQLMKLVGCNVVQFLLC 485
+G HS PA ++ +NS+L+ A +MK C V+ +LC
Sbjct: 397 SGKHSRPATPVTSSINSSLMLEAHIMMKKDECPVLTLVLC 436
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 348 VSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQQS-TDNKKKHRRN 497
+ G+ E + + G N +DDKS G D D + T NKKK R++
Sbjct: 341 IESGSTEEMRLNTDDEEMGIND-SDDKSAFGDDGDLGNSTPTKNKKKRRKH 390
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 37 RSDTNSPRSAVSTPNSNSSINVTDQSISLSQQNLETLNRMGMFFHAQQMQLNQSFDVKRL 216
R T + + S P+S SS S++ ETL+R+G + FDVKR+
Sbjct: 44 RGSTCTSSATSSAPSSTSSTRARRNWSVFSERLRETLSRVGGGGPSSTTDSLILFDVKRV 103
Query: 217 G 219
G
Sbjct: 104 G 104
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 327 EECDPVPVSPGAVESAGEGSCNSNDGYNQRTDDKSPPGSDDDTPQ 461
EE D P P + + + ++ DD+ SDDD PQ
Sbjct: 236 EESDEEPQPPKKTAKSAIATAAEDSDDDEEDDDEEEEESDDDAPQ 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,338,292
Number of Sequences: 27780
Number of extensions: 330354
Number of successful extensions: 1670
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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