Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0236
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p... 200 4e-51
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 200 4e-51
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 98 2e-20
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 98 2e-20
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 98 2e-20
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 98 2e-20
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 98 2e-20
AK125736-1|BAC86266.1| 486|Homo sapiens Smc1l1). protein. 87 8e-17
AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance ... 86 1e-16
AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance ... 86 1e-16
AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein. 86 1e-16
BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance ... 60 1e-08
AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance ... 60 1e-08
AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance ... 60 1e-08
AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated p... 60 1e-08
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 58 2e-08
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 58 2e-08
AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein. 58 2e-08
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 58 2e-08
U46075-1|AAA86843.1| 42|Homo sapiens protein ( Human mitotic c... 39 0.020
BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance ... 36 0.11
AK025769-1|BAB15236.1| 340|Homo sapiens protein ( Homo sapiens ... 36 0.11
AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein. 36 0.11
AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein. 36 0.11
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 33 1.3
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 33 1.3
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 33 1.3
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 33 1.3
DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette, s... 30 9.2
BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette, s... 30 9.2
BC016988-1|AAH16988.1| 345|Homo sapiens Unknown (protein for IM... 30 9.2
BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette, s... 30 9.2
AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette su... 30 9.2
>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
protein-C protein.
Length = 1202
Score = 200 bits (488), Expect = 4e-51
Identities = 98/146 (67%), Positives = 115/146 (78%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*FLKRIQYDTNETERDVPNDNMG 504
+ KE+LY++R AELD+IT +R+ R YE LRK+R F+ TN+ + + +G
Sbjct: 1011 KKKEELYLQRVAELDKITYERDSFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLG 1070
Query: 503 GDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLY 324
GDAELELVDSLDPFSEGI+FSVRPP KSWK I NLSGGEKTLSSLALVFALH+YKPTPLY
Sbjct: 1071 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1130
Query: 323 VMDEIDAALDFKNVSIVANYIKEERR 246
MDEIDAALDFKNVSIVA YI E+ +
Sbjct: 1131 FMDEIDAALDFKNVSIVAFYIYEQTK 1156
Score = 61.3 bits (142), Expect = 3e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = -2
Query: 255 RTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSITI 142
+TKNAQFIIISLR NMFE+S+RL+GIYKT + TKS+ +
Sbjct: 1154 QTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSVAV 1191
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 200 bits (488), Expect = 4e-51
Identities = 98/146 (67%), Positives = 115/146 (78%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*FLKRIQYDTNETERDVPNDNMG 504
+ KE+LY++R AELD+IT +R+ R YE LRK+R F+ TN+ + + +G
Sbjct: 1097 KKKEELYLQRVAELDKITYERDSFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLG 1156
Query: 503 GDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLY 324
GDAELELVDSLDPFSEGI+FSVRPP KSWK I NLSGGEKTLSSLALVFALH+YKPTPLY
Sbjct: 1157 GDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLY 1216
Query: 323 VMDEIDAALDFKNVSIVANYIKEERR 246
MDEIDAALDFKNVSIVA YI E+ +
Sbjct: 1217 FMDEIDAALDFKNVSIVAFYIYEQTK 1242
Score = 61.3 bits (142), Expect = 3e-09
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = -2
Query: 255 RTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSITI 142
+TKNAQFIIISLR NMFE+S+RL+GIYKT + TKS+ +
Sbjct: 1240 QTKNAQFIIISLRNNMFEISDRLIGIYKTYNITKSVAV 1277
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPND 513
+S D + + + E + + + + +EQ++K+R F + + + +E + +
Sbjct: 1032 ESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSR- 1090
Query: 512 NMGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPT 333
N A L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP
Sbjct: 1091 NSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPA 1150
Query: 332 PLYVMDEIDAALDFKNVSIVANYIKEE 252
P +V+DEIDAALD N+ VANYIKE+
Sbjct: 1151 PFFVLDEIDAALDNTNIGKVANYIKEQ 1177
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPND 513
+S D + + + E + + + + +EQ++K+R F + + + +E + +
Sbjct: 1032 ESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSR- 1090
Query: 512 NMGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPT 333
N A L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP
Sbjct: 1091 NSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPA 1150
Query: 332 PLYVMDEIDAALDFKNVSIVANYIKEE 252
P +V+DEIDAALD N+ VANYIKE+
Sbjct: 1151 PFFVLDEIDAALDNTNIGKVANYIKEQ 1177
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPND 513
+S D + + + E + + + + +EQ++K+R F + + + +E + +
Sbjct: 1032 ESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSR- 1090
Query: 512 NMGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPT 333
N A L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP
Sbjct: 1091 NSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPA 1150
Query: 332 PLYVMDEIDAALDFKNVSIVANYIKEE 252
P +V+DEIDAALD N+ VANYIKE+
Sbjct: 1151 PFFVLDEIDAALDNTNIGKVANYIKEQ 1177
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural maintenance
of chromosomes 1-like 1 protein.
Length = 1233
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPND 513
+S D + + + E + + + + +EQ++K+R F + + + +E + +
Sbjct: 1032 ESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSR- 1090
Query: 512 NMGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPT 333
N A L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP
Sbjct: 1091 NSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPA 1150
Query: 332 PLYVMDEIDAALDFKNVSIVANYIKEE 252
P +V+DEIDAALD N+ VANYIKE+
Sbjct: 1151 PFFVLDEIDAALDNTNIGKVANYIKEQ 1177
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/147 (35%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = -3
Query: 683 QSKEDLYIKRAAELDEITTKRNEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPND 513
+S D + + + E + + + + +EQ++K+R F + + + +E + +
Sbjct: 1032 ESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSR- 1090
Query: 512 NMGGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPT 333
N A L + +P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H YKP
Sbjct: 1091 NSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPA 1150
Query: 332 PLYVMDEIDAALDFKNVSIVANYIKEE 252
P +V+DEIDAALD N+ VANYIKE+
Sbjct: 1151 PFFVLDEIDAALDNTNIGKVANYIKEQ 1177
>AK125736-1|BAC86266.1| 486|Homo sapiens Smc1l1). protein.
Length = 486
Score = 86.6 bits (205), Expect = 8e-17
Identities = 47/132 (35%), Positives = 79/132 (59%), Gaps = 3/132 (2%)
Frame = -3
Query: 638 EITTKRNEM-RALYEQLRKKRST*FLKRIQYDTNETERDVPN--DNMGGDAELELVDSLD 468
E + K M R +EQ++K+R F + ++ + ++ N A L + +
Sbjct: 293 EASRKEARMCRQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSPENPEE 352
Query: 467 PFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFK 288
P+ EGI ++ P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD
Sbjct: 353 PYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNT 412
Query: 287 NVSIVANYIKEE 252
N+ V++YIKE+
Sbjct: 413 NIGKVSSYIKEQ 424
>AL021391-1|CAI18928.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = -3
Query: 611 RALYEQLRKKRST*FLKRIQYDTNETERDVPN--DNMGGDAELELVDSLDPFSEGIIFSV 438
R +EQ++K+R F + ++ + ++ N A L + +P+ EGI ++
Sbjct: 1052 RQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNC 1111
Query: 437 RPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD N+ V++YIK
Sbjct: 1112 VAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIK 1171
Query: 257 EE 252
E+
Sbjct: 1172 EQ 1173
>AL008718-2|CAI17945.1| 1235|Homo sapiens structural maintenance of
chromosomes 1B protein.
Length = 1235
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = -3
Query: 611 RALYEQLRKKRST*FLKRIQYDTNETERDVPN--DNMGGDAELELVDSLDPFSEGIIFSV 438
R +EQ++K+R F + ++ + ++ N A L + +P+ EGI ++
Sbjct: 1052 RQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNC 1111
Query: 437 RPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD N+ V++YIK
Sbjct: 1112 VAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIK 1171
Query: 257 EE 252
E+
Sbjct: 1172 EQ 1173
>AJ504806-1|CAD43404.2| 1235|Homo sapiens SMC1beta protein protein.
Length = 1235
Score = 86.2 bits (204), Expect = 1e-16
Identities = 44/122 (36%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
Frame = -3
Query: 611 RALYEQLRKKRST*FLKRIQYDTNETERDVPN--DNMGGDAELELVDSLDPFSEGIIFSV 438
R +EQ++K+R F + ++ + ++ N A L + +P+ EGI ++
Sbjct: 1052 RQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNC 1111
Query: 437 RPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
P K + + NLSGGEK +++LAL+FA+H ++P P +V+DE+DAALD N+ V++YIK
Sbjct: 1112 VAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIK 1171
Query: 257 EE 252
E+
Sbjct: 1172 EQ 1173
>BC130385-1|AAI30386.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -3
Query: 458 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 282
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 281 SIVANYIK 258
+ ++
Sbjct: 1125 QNIGQMLR 1132
>AL354938-1|CAI16923.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -3
Query: 458 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 282
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 281 SIVANYIK 258
+ ++
Sbjct: 1125 QNIGQMLR 1132
>AL161791-1|CAI16866.1| 1197|Homo sapiens structural maintenance of
chromosomes 2 protein.
Length = 1197
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -3
Query: 458 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 282
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 281 SIVANYIK 258
+ ++
Sbjct: 1125 QNIGQMLR 1132
>AF092563-1|AAC72360.1| 1197|Homo sapiens chromosome-associated
protein-E protein.
Length = 1197
Score = 59.7 bits (138), Expect = 1e-08
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = -3
Query: 458 EGIIFSVRPPNKSWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNV 282
+G+ F V N +WK N++ LSGG+++L +L+L+ ++ +KP P+Y++DE+DAALD +
Sbjct: 1066 DGLEFKVALGN-TWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHT 1124
Query: 281 SIVANYIK 258
+ ++
Sbjct: 1125 QNIGQMLR 1132
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = -3
Query: 557 IQYDTNETERDVPNDNMGGDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKT 381
++ ++ E + ++ G V S+D F+ GI S + + LSGG+K+
Sbjct: 1062 VEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKS 1121
Query: 380 LSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
L +LAL+FA+ P P Y+ DEID ALD ++ V++ I E
Sbjct: 1122 LVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIME 1163
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = -3
Query: 557 IQYDTNETERDVPNDNMGGDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKT 381
++ ++ E + ++ G V S+D F+ GI S + + LSGG+K+
Sbjct: 1062 VEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKS 1121
Query: 380 LSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
L +LAL+FA+ P P Y+ DEID ALD ++ V++ I E
Sbjct: 1122 LVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIME 1163
>AJ005015-1|CAA06289.1| 391|Homo sapiens SMC-like protein protein.
Length = 391
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = -3
Query: 557 IQYDTNETERDVPNDNMGGDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKT 381
++ ++ E + ++ G V S+D F+ GI S + + LSGG+K+
Sbjct: 236 VEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKS 295
Query: 380 LSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
L +LAL+FA+ P P Y+ DEID ALD ++ V++ I E
Sbjct: 296 LVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIME 337
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = -3
Query: 557 IQYDTNETERDVPNDNMGGDAELELVDSLDPFSE-GIIFSVRPPNKSWKNISNLSGGEKT 381
++ ++ E + ++ G V S+D F+ GI S + + LSGG+K+
Sbjct: 1062 VEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKS 1121
Query: 380 LSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
L +LAL+FA+ P P Y+ DEID ALD ++ V++ I E
Sbjct: 1122 LVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIME 1163
>U46075-1|AAA86843.1| 42|Homo sapiens protein ( Human mitotic
chromosome condensation protein mRNA, partial cds. ).
Length = 42
Score = 38.7 bits (86), Expect = 0.020
Identities = 14/36 (38%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = -3
Query: 422 SWK-NISNLSGGEKTLSSLALVFALHYYKPTPLYVM 318
+WK N++ LSGG+++L +L+L+ ++ KP P+Y++
Sbjct: 7 TWKENLTELSGGQRSLVALSLILSMLLLKPAPIYIL 42
>BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance of
chromosomes 6 protein.
Length = 1091
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 306
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 305 AALDFKNVSIVANYI 261
+D N I + I
Sbjct: 1019 VYMDMVNRRIAMDLI 1033
>AK025769-1|BAB15236.1| 340|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22116 fis, clone HEP18520. ).
Length = 340
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 306
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 208 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 267
Query: 305 AALDFKNVSIVANYI 261
+D N I + I
Sbjct: 268 VYMDMVNRRIAMDLI 282
>AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein.
Length = 1091
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 306
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 305 AALDFKNVSIVANYI 261
+D N I + I
Sbjct: 1019 VYMDMVNRRIAMDLI 1033
>AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein.
Length = 1091
Score = 36.3 bits (80), Expect = 0.11
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SLDPFSEGIIFSVRPP--NKS-WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEID 306
+ D +E + SV+P NK+ + ++ LSGGE++ S++ + +L +P +DE D
Sbjct: 959 NFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFD 1018
Query: 305 AALDFKNVSIVANYI 261
+D N I + I
Sbjct: 1019 VYMDMVNRRIAMDLI 1033
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.7 bits (71), Expect = 1.3
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Frame = -3
Query: 665 YIKRAAELDEITTKRNEMRALYEQLR------KKRST*FLKRIQYDTNETERDVPND-NM 507
Y KR E++++T + + +Q R K+R LK + NE + +
Sbjct: 893 YTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQC 952
Query: 506 GGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNL-----SGGEKTLSSLALVFALHYY 342
G+ +L + D GI +R +S + L SGGE+++S++ + AL
Sbjct: 953 AGEVDLHTENEEDYDKYGI--RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQEL 1010
Query: 341 KPTPLYVMDEIDAALDFKNVSIVANYIKEERRTLNS*SYRFDTTCLRCRIVWS 183
P V+DEI+ +D N V + N+ Y F T L + +S
Sbjct: 1011 NRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYS 1063
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 32.7 bits (71), Expect = 1.3
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Frame = -3
Query: 665 YIKRAAELDEITTKRNEMRALYEQLR------KKRST*FLKRIQYDTNETERDVPND-NM 507
Y KR E++++T + + +Q R K+R LK + NE + +
Sbjct: 893 YTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQC 952
Query: 506 GGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNL-----SGGEKTLSSLALVFALHYY 342
G+ +L + D GI +R +S + L SGGE+++S++ + AL
Sbjct: 953 AGEVDLHTENEEDYDKYGI--RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQEL 1010
Query: 341 KPTPLYVMDEIDAALDFKNVSIVANYIKEERRTLNS*SYRFDTTCLRCRIVWS 183
P V+DEI+ +D N V + N+ Y F T L + +S
Sbjct: 1011 NRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYS 1063
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 32.7 bits (71), Expect = 1.3
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Frame = -3
Query: 665 YIKRAAELDEITTKRNEMRALYEQLR------KKRST*FLKRIQYDTNETERDVPND-NM 507
Y KR E++++T + + +Q R K+R LK + NE + +
Sbjct: 893 YTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQC 952
Query: 506 GGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNL-----SGGEKTLSSLALVFALHYY 342
G+ +L + D GI +R +S + L SGGE+++S++ + AL
Sbjct: 953 AGEVDLHTENEEDYDKYGI--RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQEL 1010
Query: 341 KPTPLYVMDEIDAALDFKNVSIVANYIKEERRTLNS*SYRFDTTCLRCRIVWS 183
P V+DEI+ +D N V + N+ Y F T L + +S
Sbjct: 1011 NRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYS 1063
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 32.7 bits (71), Expect = 1.3
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Frame = -3
Query: 665 YIKRAAELDEITTKRNEMRALYEQLR------KKRST*FLKRIQYDTNETERDVPND-NM 507
Y KR E++++T + + +Q R K+R LK + NE + +
Sbjct: 912 YTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQC 971
Query: 506 GGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNL-----SGGEKTLSSLALVFALHYY 342
G+ +L + D GI +R +S + L SGGE+++S++ + AL
Sbjct: 972 AGEVDLHTENEEDYDKYGI--RIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQEL 1029
Query: 341 KPTPLYVMDEIDAALDFKNVSIVANYIKEERRTLNS*SYRFDTTCLRCRIVWS 183
P V+DEI+ +D N V + N+ Y F T L + +S
Sbjct: 1030 NRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYS 1082
>DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ + LSGGE +LAL KP +Y++DE A LD + + A +K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVK 505
>BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ + LSGGE +LAL KP +Y++DE A LD + + A +K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVK 505
>BC016988-1|AAH16988.1| 345|Homo sapiens Unknown (protein for
IMAGE:4396587) protein.
Length = 345
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ + LSGGE +LAL KP +Y++DE A LD + + A +K
Sbjct: 203 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVK 251
>BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ + LSGGE +LAL KP +Y++DE A LD + + A +K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVK 505
>AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette
sub-family E member 1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 9.2
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ + LSGGE +LAL KP +Y++DE A LD + + A +K
Sbjct: 457 QEVQTLSGGELQRVALALCLG----KPADVYLIDEPSAYLDSEQRLMAARVVK 505
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,036,142
Number of Sequences: 237096
Number of extensions: 1739447
Number of successful extensions: 7114
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7112
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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