Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0236
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 136 2e-32
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 136 2e-32
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 130 9e-31
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 84 8e-17
AF003136-11|ABD63228.1| 140|Caenorhabditis elegans High inciden... 82 4e-16
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 55 4e-08
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 55 4e-08
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 55 4e-08
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 55 4e-08
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 53 2e-07
Z69787-3|CAA93638.2| 537|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 39 0.003
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 37 0.016
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 36 0.037
Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical p... 30 1.4
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 30 1.8
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 29 2.4
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 29 4.3
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 29 4.3
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 29 4.3
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 28 5.6
U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical pr... 28 7.4
U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified vi... 28 7.4
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 136 bits (328), Expect = 2e-32
Identities = 72/148 (48%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Frame = -3
Query: 668 LYIKRAAELDEITTKRNEMRALYEQLRKKRST*FLKRIQYDTNETERDVPNDNMGGDAEL 489
L + + + K R +LR R F + + + T+ GGDA L
Sbjct: 1153 LLMNEVTSAKKFSDKLKAHREKLNELRMARFNEFSEALAFLGTTTQMLYQLITNGGDASL 1212
Query: 488 ELVD---SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVM 318
+ V+ S DPF GI FSVRP KSWK I NLSGGEKTL+SL VFA+H+Y+PTPLYVM
Sbjct: 1213 KFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVFAMHHYRPTPLYVM 1272
Query: 317 DEIDAALDFKNVSIVANYIKEERRTLNS 234
DEIDAALD NVS++ANYIK RT N+
Sbjct: 1273 DEIDAALDLNNVSLIANYIKHSERTRNA 1300
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -2
Query: 255 RTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSITIE 139
RT+NAQFIIISLR MFEV NRL+GIYK + T +I ++
Sbjct: 1296 RTRNAQFIIISLRNQMFEVGNRLLGIYKIDGKTYNIMVD 1334
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 136 bits (328), Expect = 2e-32
Identities = 72/148 (48%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Frame = -3
Query: 668 LYIKRAAELDEITTKRNEMRALYEQLRKKRST*FLKRIQYDTNETERDVPNDNMGGDAEL 489
L + + + K R +LR R F + + + T+ GGDA L
Sbjct: 1153 LLMNEVTSAKKFSDKLKAHREKLNELRMARFNEFSEALAFLGTTTQMLYQLITNGGDASL 1212
Query: 488 ELVD---SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVM 318
+ V+ S DPF GI FSVRP KSWK I NLSGGEKTL+SL VFA+H+Y+PTPLYVM
Sbjct: 1213 KFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVFAMHHYRPTPLYVM 1272
Query: 317 DEIDAALDFKNVSIVANYIKEERRTLNS 234
DEIDAALD NVS++ANYIK RT N+
Sbjct: 1273 DEIDAALDLNNVSLIANYIKHSERTRNA 1300
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -2
Query: 255 RTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSITIE 139
RT+NAQFIIISLR MFEV NRL+GIYK + T +I ++
Sbjct: 1296 RTRNAQFIIISLRNQMFEVGNRLLGIYKIDGKTYNIMVD 1334
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 130 bits (314), Expect = 9e-31
Identities = 57/85 (67%), Positives = 71/85 (83%)
Frame = -3
Query: 506 GGDAELELVDSLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPL 327
GGDA+LE +D DPF +GI F VRP K+WK I LSGGEKTLSSLAL+FALH ++PTP
Sbjct: 1243 GGDAKLEYIDKDDPFRQGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPF 1302
Query: 326 YVMDEIDAALDFKNVSIVANYIKEE 252
YVMDEIDAALD++NVSI+A Y++++
Sbjct: 1303 YVMDEIDAALDYRNVSIIAQYVRQK 1327
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = -2
Query: 255 RTKNAQFIIISLRYNMFEVSNRLVGIYKTEDCTKSITIE 139
+T+NAQFIIISLR NMFE++NRLVGIYK + CT+++ I+
Sbjct: 1327 KTENAQFIIISLRNNMFELANRLVGIYKVDGCTRNVAID 1365
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 84.2 bits (199), Expect = 8e-17
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Frame = -3
Query: 647 ELDEITTKRNEMRALYEQL---RKKRST*FLKRIQYDTNETERDVPNDNMGGDAELELVD 477
EL+ K +R +E++ R +R F + ++ + + N A L +
Sbjct: 1083 ELENARKKAKRIRQQFEKVKTDRYRRFQDFFDPVANTIDDIYKQLSR-NTSAQAFLGADN 1141
Query: 476 SLDPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAAL 297
+P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H P P +V+DEIDAAL
Sbjct: 1142 MEEPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAAL 1201
Query: 296 DFKNVSIVANYIKEERR 246
D N+ VA+YI E R
Sbjct: 1202 DNTNIGKVASYICESAR 1218
>AF003136-11|ABD63228.1| 140|Caenorhabditis elegans High incidence
of males (increasedx chromosome loss) protein 1, isoform
b protein.
Length = 140
Score = 81.8 bits (193), Expect = 4e-16
Identities = 37/75 (49%), Positives = 54/75 (72%)
Frame = -3
Query: 470 DPFSEGIIFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDF 291
+P+ +GI ++ P K ++ + NLSGGEKT+++LAL+FA+H P P +V+DEIDAALD
Sbjct: 3 EPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDN 62
Query: 290 KNVSIVANYIKEERR 246
N+ VA+YI E R
Sbjct: 63 TNIGKVASYICESAR 77
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 413 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIK 1147
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 413 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIK 1147
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 413 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIK 1147
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -3
Query: 413 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
++ LSGG+++L +L+L+ A+ +KP PLY++DE+DAALD + + + IK
Sbjct: 1096 SLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALDLSHTANIGMMIK 1147
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/53 (43%), Positives = 38/53 (71%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+ ++ LSGG+K+L +LA++F++ P P Y+ DEIDAALD ++ VA+ I+
Sbjct: 1098 REMTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMIQ 1150
>Z69787-3|CAA93638.2| 537|Caenorhabditis elegans Hypothetical
protein C44C10.4 protein.
Length = 537
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = -3
Query: 620 NEMRALYEQLRKKRST*F---LKRIQYDTNETERDVPNDNMGGDAELELVDSLDPFSEGI 450
+E R +E+LR RS F + +Q + ++ D A L +D +P+
Sbjct: 388 SEARLNWEKLRVMRSARFNNFMAPLQTSLSRIYAEIAQDE-DSLAFLRPLDEEEPYLAID 446
Query: 449 IFSVRPPNKSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVA 270
F V+ + + GG + + LAL+FA+H +KP+PL V+D+ID L + +
Sbjct: 447 AF-VKERHSEHISTRTFHGGSRMIVDLALIFAIHEWKPSPLVVIDDIDRNLYHEASKKIE 505
Query: 269 NYIKEERRT 243
Y+ +++T
Sbjct: 506 PYLSRQKQT 514
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical protein
F54D5.14 protein.
Length = 1130
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3
Query: 425 KSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
K +++ LSGGE++ + ALV +L P +MDE D +D N +V + + E
Sbjct: 1036 KRVRDLKGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVE 1092
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -3
Query: 425 KSWKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
K +++ LSGGE++ + ALV +L P +MDE D +D N +V + + E
Sbjct: 1036 KRVRDLKGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVE 1092
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical protein
C23H4.6 protein.
Length = 1137
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 413 NISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKE 255
++ LSGGE++ + ALV +L P ++DE D +D N +V + + E
Sbjct: 1047 DLKGLSGGERSFVTAALVMSLWEVMEQPFRMLDEFDVFMDMMNRKLVMDLLVE 1099
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical protein
C27A2.1 protein.
Length = 1076
Score = 35.5 bits (78), Expect = 0.037
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = -3
Query: 515 DNMG--GDAELELVDS-LDPFSEGIIFSVR-PPNKSWKNISNL--SGGEKTLSSLALVFA 354
D++G G+ LE+ ++ LD GI+ V +S K + N SGGE++++++ + A
Sbjct: 919 DSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNKVQSGGERSVATMLYLLA 978
Query: 353 LHYYKPTPLYVMDEIDAALDFKN 285
L P P +DEI+ +D N
Sbjct: 979 LQQLCPVPFRCIDEINQGMDPTN 1001
>Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical
protein C54G10.3 protein.
Length = 660
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -3
Query: 419 WKNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKEERRTL 240
W + LS GE SLA VF Y KP ++ +DE +A+ F+ + ++EE+ T
Sbjct: 553 WDWMKTLSPGELQRLSLARVF---YTKPRIVF-LDESTSAIGFELEMAIYRKLQEEKITF 608
Query: 239 NS*SYRF 219
S +R+
Sbjct: 609 VSIGHRY 615
>Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical
protein C47E12.9 protein.
Length = 204
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 249 SFFLNIVCHDRNVFEVQGRVYLVHDVQRRWFV 344
SFF N+VC D+ + V Y++HD ++W V
Sbjct: 15 SFFKNVVCEDQVM--VHTFEYILHDYAKQWIV 44
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3
Query: 404 NLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIKEE 252
NLS G++ L +LA H T + V+DE AA+D +++ I+EE
Sbjct: 1012 NLSVGQRQLVALARALLRH----TRVLVLDEATAAVDVATDALIQETIREE 1058
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3
Query: 416 KNISNLSGGEKTLSSLALVFALHYYKPTPLYVMDEIDAALDFKNVSIVANYIK 258
+N+ LSGGE +LAL K LY++DE A LD + A IK
Sbjct: 467 RNVKELSGGELQRVALALCLG----KTASLYLIDEPSAYLDSEQRLHAAKVIK 515
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 86 KTSFIHAPSTRTCSGSWFSIV-IDFVQSSVLY 178
KTSF+H + T +G + S V IDF + V+Y
Sbjct: 20 KTSFLHRYTDNTFTGQFISTVGIDFKEKKVVY 51
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 86 KTSFIHAPSTRTCSGSWFSIV-IDFVQSSVLY 178
KTSF+H + T +G + S V IDF + V+Y
Sbjct: 20 KTSFLHRYTDNTFTGQFISTVGIDFKEKKVVY 51
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 86 KTSFIHAPSTRTCSGSWFSIV-IDFVQSSVLY 178
KTSF+H + T +G + S V IDF + V+Y
Sbjct: 20 KTSFLHRYTDNTFTGQFISTVGIDFKEKKVVY 51
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2
Query: 177 YKTEDCTKSITIENQLPEQVR 115
Y TE+CT++++I+ PE V+
Sbjct: 169 YPTEECTETVSIDGNTPEPVK 189
>U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical
protein T16A1.1a protein.
Length = 650
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = -3
Query: 311 IDAALDFKNVSIVANYIKEERRTLNS*SYRFDTTCLRCRIVWSVYTKLKTAQSL 150
+ A D S+V ++ EE +N Y + T C I W + + K + L
Sbjct: 550 VPIADDLPASSLVIKHVVEEISNINEAEYNYSKTKKHCEIPWRISAQRKQQRIL 603
>Z92780-2|CAB07177.1| 115|Caenorhabditis elegans Hypothetical
protein C45G3.4 protein.
Length = 115
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 701 PSDTGXQSKEDLYIKRAAELDEITTKRNEM 612
P + Q KED Y KRA ++ E T KR E+
Sbjct: 29 PENNNAQEKEDHYTKRAIDIGE-TKKRLEL 57
>U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 3 protein.
Length = 755
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 394 PDKFDMFFQDLFGGRTLN 447
PD+FD+F +D++G R N
Sbjct: 220 PDEFDIFIRDIYGDRASN 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,925
Number of Sequences: 27780
Number of extensions: 282476
Number of successful extensions: 922
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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