Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0235
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12) 40 0.002
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 38 0.005
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 36 0.038
SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87) 32 0.46
SB_7899| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 30 1.4
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 29 3.3
SB_11459| Best HMM Match : Tropomyosin (HMM E-Value=2.9) 29 3.3
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 29 3.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 4.3
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 28 5.7
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_33722| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.7
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 28 5.7
SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.7
SB_48850| Best HMM Match : EGF_CA (HMM E-Value=2.1e-27) 28 5.7
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58782| Best HMM Match : Hormone_5 (HMM E-Value=2.1) 27 9.9
SB_58720| Best HMM Match : Cupin_5 (HMM E-Value=3.8e-21) 27 9.9
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_2768| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 27 9.9
SB_40099| Best HMM Match : GRP (HMM E-Value=1.5) 27 9.9
>SB_7770| Best HMM Match : Aldolase_II (HMM E-Value=2.6e-12)
Length = 716
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +2
Query: 458 PVHRGGRRALEAASGRHDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDASLL 637
P +G RA+ + + DVR ++ R+RV ++ ++FREELE ++ GD +L
Sbjct: 221 PTEKGFDRAISTPD-QINRDVRGLKLRQRVSIVLGDEVFREELEEIVGSNSCSPGDPLVL 279
Query: 638 QR 643
+R
Sbjct: 280 ER 281
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 430 QRRSRTAPDPCPPRR-KTSA*SSVRPT*RRCPRNGTPEARRSSHVLEAVP 576
+RR R P PCPPR SA SS P +C GT R+ V EA P
Sbjct: 78 RRRRRRRPPPCPPRNCAVSAWSSWGPCTHQCGNAGTQTRTRTKTVSEACP 127
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 515 DVREMERRKRVEALMSSKLFREELERVLDQQMHEG 619
DVR ++ R+RV +++ K+ REELE +++ +H G
Sbjct: 36 DVRGLKLRQRVSLVLNDKVLREELEDIVENFVHNG 70
>SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87)
Length = 212
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 403 ELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPT*RRCPRNGTPEARRSSHVLEAVPRR 582
+LS + +R RRS P PPRR++S PT RR G P +++ V+++ R
Sbjct: 149 QLSNYQQRV-RRSSDREAPPPPRRRSSDRGMTTPTRRRSSEKG-PASQKPQFVVQSAVAR 206
>SB_7899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 434 DDPERHRTPVHRGGRRALEAASGRHDADVREMERRKRVEALMSSKLFREELERVL 598
DD E ++ HRGG++ R + + E+ERR RV+ +S+ RE L R++
Sbjct: 110 DDLEINKKATHRGGKKKKRILFTR--SQIYELERRFRVQQYLSAP-EREHLARMI 161
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 433 RRSRTAPDPCPP-RRKTSA*SSVRPT*RRCPRNGTPEARRSSHVLEAVPRRIGTGP 597
RR R +P P PP RR+ + S P RR + +P RSS + +R T P
Sbjct: 907 RRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPP 962
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +1
Query: 433 RRSRTAPDPCPPRRKTSA*SSVRPT*RRCPRNGTPEARRSSHVLEAVPRRIGTGP 597
RR R +P P P RR+ + S R R P P RR + PRR P
Sbjct: 885 RRRRRSPSPPPRRRRRDSYSPSRRR-RDSPTPSPPPRRRRKSPSPSPPRRRRRSP 938
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -3
Query: 478 SSSSVDRGPVPFGIVSESVSAIPTARVY*SQLDSSCVTLLPESSQRRQRNVNIAHRLVKQ 299
+SS D P F IV + + P A + S V P S Q+R ++ VKQ
Sbjct: 1194 TSSKTDHSPQVFAIVGQGQTVRPVASEVPKPVAVSIVQQTPTSYQKRHEETSVPGSAVKQ 1253
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 431 RDDPERHRTPVHRGGRRALEAASGRHDADVREMERRKRVEALMS 562
++ E+ R ++A+E R ++ ERR+RVE +MS
Sbjct: 373 KEREEQERIAREEAEKKAIEDEERRKQEEIERQERRRRVEQIMS 416
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 397 RLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSVRPT*RRCPRNGTPEARRSSHVLEAVP 576
RL+L + +T+R + P P PP K + S++RP ++ + ++S L A P
Sbjct: 1257 RLDLKD--TQTKRHNPNLPPPVPPPSKPTDKSNLRPAYKKLVDSQDTAIEKASPSLPAPP 1314
Query: 577 R 579
R
Sbjct: 1315 R 1315
>SB_46539| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 300
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +1
Query: 124 KCVFLQI*CF-VLSAC-YDRRSN-LCVNFVCSDHLICRYA 234
+CV + I C+ V+ C Y+ S CV+F+ +++CRYA
Sbjct: 157 RCVVMSICCYDVMLLCRYNVTSKYFCVDFLICCYVVCRYA 196
>SB_11459| Best HMM Match : Tropomyosin (HMM E-Value=2.9)
Length = 226
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 428 LRDDPERHRTPVHRGGRRALEAASGRHDADVREMERRKRVEALMSSKLFREELERVLDQQ 607
LRD E+ + P G L +G DADV+++ R+ + L R +LE LD +
Sbjct: 136 LRDKLEQMKIPSREGKPHPLRTYNGLTDADVKKLMRQTERDKLQLEGQLR-DLEWRLDNE 194
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 530 PFRGHRRHVGRTLLQALVFLLGGQGSGAV 444
P R R H G +LL+ +++LGG GS ++
Sbjct: 505 PMRVPRYHAGASLLRDRIYVLGGTGSDSL 533
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = +1
Query: 319 QYLRCAAVVAKIPEVTLRRTSPIGINRLELSEWLRRTQRRSRTAPDPCPPRRKTSA*SSV 498
Q R + A P T +++P+G + + QRR+ PPRR++ +
Sbjct: 513 QTRRVSPTQAVRPSSTQGQSAPVGRTKSPSRSYTSPRQRRTSPNNRSPPPRRRSPSPRRP 572
Query: 499 RPT*RR---CPRNGTPEARRSSHVLEAV-PRR 582
P+ RR P +P RR + V PRR
Sbjct: 573 SPSPRRRSTSPSRKSPPPRRVHRHQDVVHPRR 604
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -3
Query: 598 EDPFQFFAEQLRGHESFDALPAFHFADIGVMSAGRCFKRSSSSSVDRGPVPFG 440
EDP + FAE R E F F +G + F+ + SS G FG
Sbjct: 28 EDPMKIFAEVFRDEEPFKEFEDFFMDGLG-CGFQKVFQTGNFSSYSTGQKGFG 79
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/75 (32%), Positives = 31/75 (41%)
Frame = -2
Query: 542 ASGVPFRGHRRHVGRTLLQALVFLLGGQGSGAVRDRL*VRLSHSDSSSLLIPIGLVLRNV 363
ASG+P R RRH G AL + AV VR H L + +G V
Sbjct: 934 ASGLPIRNGRRHAGEIAKMALHLV------DAVSHNFIVR--HKPEYKLQLRVGCHTGPV 985
Query: 362 TSGIFATTAAQRKYC 318
+G+ T A +YC
Sbjct: 986 VAGVVGNTMA--RYC 998
>SB_33722| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 124
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL 629
+CP S N++GS T RC + TL
Sbjct: 11 NCPASADCFNYDGSYTCRCKRGYTL 35
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL 629
+CP S N++GS T RC + TL
Sbjct: 93 NCPASADCFNYDGSYTCRCKRGYTL 117
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -3
Query: 598 EDPFQFFAEQLRGHESFDALPAFHFADIGVMSAGRCFKRSSSSSVDRGPVPFG 440
EDP + FAE R E F F +G + F+ + SS G FG
Sbjct: 93 EDPMKIFAEVFRDEEPFKEFEDFFMDGLG-CGFQKVFQTGNFSSYSTGQKGFG 144
>SB_8580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL 629
+CP S N NGS T RC + TL
Sbjct: 337 TCPASADCVNNNGSYTCRCKRGFTL 361
>SB_2182| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 299
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL 629
+CP S N NGS T RC + TL
Sbjct: 268 TCPASADCVNNNGSYTCRCKRGFTL 292
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL--RFCRG 644
+CP S N NGS T RC TL C+G
Sbjct: 206 NCPASADCVNNNGSYTCRCKPGFTLVNNTCKG 237
>SB_48850| Best HMM Match : EGF_CA (HMM E-Value=2.1e-27)
Length = 83
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 555 SCPRSCSAKNWNGSSTSRCTKAATL 629
+CP S N++GS T RC + TL
Sbjct: 52 NCPASADCFNYDGSYTCRCKRGYTL 76
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 441 PNGTGPLSTEEEDERLKQRPADMTP 515
PNG P+ + RL RPADM P
Sbjct: 296 PNGRPPVPRQGPGSRLPPRPADMKP 320
>SB_58782| Best HMM Match : Hormone_5 (HMM E-Value=2.1)
Length = 215
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +1
Query: 154 VLSACYDRRSNLCVNFVCSDHLICRYAG 237
V+ C+ LC+N C H+I ++G
Sbjct: 85 VIVTCFQTPHRLCINGTCMGHMIPMFSG 112
>SB_58720| Best HMM Match : Cupin_5 (HMM E-Value=3.8e-21)
Length = 181
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 514 GVMSAGRCFKRSSSSSVDRGPVPFGIVSESVS 419
G + AGR + + G PFG++SE+V+
Sbjct: 116 GYLKAGRVMSELTEYAAFDGETPFGLISEAVA 147
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 465 TEEEDERLKQRPADMTPMSAKWNAGSASKLSCPRSCSAKNWNGSSTSRCTKAATL 629
T + E + PA++T G +CP S N +GS T RC + TL
Sbjct: 913 TPKFSEAVGDAPANLTSCDDIDECG-LGVATCPASADCVNNDGSYTCRCKRGYTL 966
>SB_9661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 290 TQVLLDKSMCNIYVALPSLRRFRK*RYAGRVQLGSIDSSCRNG 418
T L+++ M Y P RR R GR +G +D+SCRNG
Sbjct: 336 TIALVERIMSEEYFESPLGRR----RPPGRRVVGLLDASCRNG 374
>SB_2768| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 389
Score = 27.5 bits (58), Expect = 9.9
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Frame = +3
Query: 291 PRSCLTSRCAIFTLRCRRCEDSGSNVTQDESNWDQ*TRAVGMAETDSETIPNGTGPLSTE 470
PR C + + LRC+ Q++ Q T ++ ET G L T+
Sbjct: 153 PRICPYLKRCTYGLRCKFYHPERDPGRQEKQELRQVTSSISQGRYLRETPQGNGGMLQTQ 212
Query: 471 EEDERLKQRPADMTPM-----SAKWNAGSASKLSCPRSCSAKNWNGSSTSRCTKAATLR 632
+ + + P + P + N ++ LS ++ + ++ NG R TK++ R
Sbjct: 213 DSQHKARAAPRNGGPQYTTSPYGQLNMQYSAALSHRQALTMRD-NGRDMERHTKSSATR 270
>SB_40099| Best HMM Match : GRP (HMM E-Value=1.5)
Length = 80
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 405 AVGMAETDSETIPNGTGPLSTEEEDERLKQRPADMTPMSAKWNAGSASKLSCPRSC 572
A +AET +ETI T + E E + A+M +A N S +C +C
Sbjct: 14 AEAVAETAAETIAETTAEAAAEGAAEAAAEGAAEMAAEAAAENGSRDSGGNCGGNC 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,431
Number of Sequences: 59808
Number of extensions: 448220
Number of successful extensions: 1490
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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