Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0235
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.3  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   8.3  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 488 EAASGRHDADVREMERRKRVEALMSSKLFREELE 589
           EA +   +AD  E E  +  + L  ++L  EELE
Sbjct: 87  EAEADEEEADESESEESEESDELEEARLVAEELE 120


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 422 DGLRDDPERHRTPVHRGGRRALEAASGRHDADVREMER-RKRVEALMSSKLFREELERVL 598
           D + ++      P  R   +A+EA     +A  RE+ER R   E+    K  ++E+ R  
Sbjct: 6   DSISEEERSLFRPFTRESLQAIEARIADEEAKQRELERKRAEGESDFGRKKKKKEI-RYD 64

Query: 599 DQQMHEG 619
           D+   EG
Sbjct: 65  DEDEDEG 71


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = -3

Query: 163  H*ARNIIFVKTRTYRSLYNFYSTSLTDTACTGVIS 59
            H   NII +    Y S Y      L  TAC G  S
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAGTNS 3136


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 541 LPAFHFADIGVMSAGRCFKRSSSSSVDRGPV 449
           +PA   A  GV SAG   K ++S+ V  G V
Sbjct: 41  VPARTMATGGVKSAGTATKLATSTPVSTGEV 71


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 521 REMERRKRVEALMSSKLFREELERVLDQ 604
           ++ + RKR EAL+ S    EEL ++L +
Sbjct: 109 KQNKPRKRPEALLISDCTSEELAKLLKE 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,414
Number of Sequences: 2352
Number of extensions: 14695
Number of successful extensions: 54
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)