Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0232
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 5e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 5e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 5e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 5e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 5e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 89 4e-18
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 78 6e-15
SB_54| Best HMM Match : Actin (HMM E-Value=0) 75 6e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 8e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 41 0.001
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 34 0.096
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 30 1.6
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 30 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 29 3.6
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 29 4.8
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 28 6.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 6.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 8.4
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (457), Expect = 5e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTQIMFETFNTPAM 506
APLNPKANREKMTQIMFETFN+PAM
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAM 133
Score = 103 bits (246), Expect = 2e-22
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI MKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL 194
Query: 689 PER 697
ER
Sbjct: 195 TER 197
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (457), Expect = 5e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 432 APLNPKANREKMTQIMFETFNTPAM 506
APLNPKANREKMTQIMFETFN+PAM
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAM 132
Score = 100 bits (239), Expect = 1e-21
Identities = 44/49 (89%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI MKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 689 PER 697
ER
Sbjct: 194 TER 196
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (457), Expect = 5e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 432 APLNPKANREKMTQIMFETFNTPAM 506
APLNPKANREKMTQIMFETFN+PAM
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAM 132
Score = 101 bits (242), Expect = 6e-22
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI MKIL
Sbjct: 134 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 193
Query: 689 PER 697
ER
Sbjct: 194 TER 196
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (457), Expect = 5e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTQIMFETFNTPAM 506
APLNPKANREKMTQIMFETFN+PAM
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAM 133
Score = 107 bits (257), Expect = 9e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI MKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 689 PER 697
ER
Sbjct: 195 TER 197
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (457), Expect = 5e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 APLNPKANREKMTQIMFETFNTPAM 506
APLNPKANREKMTQIMFETFN+PAM
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAM 133
Score = 103 bits (246), Expect = 2e-22
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 70.9 bits (166), Expect = 9e-13
Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 2/39 (5%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 619
VAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 135 VAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 101 bits (242), Expect = 6e-22
Identities = 44/49 (89%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
Score = 92.3 bits (219), Expect = 3e-19
Identities = 46/63 (73%), Positives = 48/63 (76%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI MKIL
Sbjct: 97 VAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKIL 156
Query: 689 PER 697
ER
Sbjct: 157 TER 159
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/43 (93%), Positives = 40/43 (93%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 380
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 453 NREKMTQIMFETFNTPAM 506
N + M +IMFETFN+PAM
Sbjct: 78 NWDDMEKIMFETFNSPAM 95
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 258 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 434
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 435 PLNPKANREKMTQIMFETF 491
PLNP NREKM ++MFE +
Sbjct: 113 PLNPMKNREKMIEVMFENY 131
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 485 NIQHARHVVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 628
N Q +AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 130 NYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPH 177
Score = 44.4 bits (100), Expect = 9e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 127 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/63 (68%), Positives = 46/63 (73%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKIL 688
VAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAI MK++
Sbjct: 13 VAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLM 72
Query: 689 PER 697
ER
Sbjct: 73 TER 75
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 78.2 bits (184), Expect = 6e-15
Identities = 32/42 (76%), Positives = 42/42 (100%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 634
+++QAVLSLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I
Sbjct: 160 ISMQAVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSI 201
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +3
Query: 408 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 506
+HPVLLTEAPLNP+ NREK ++ FETFN PA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPAL 158
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +2
Query: 509 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 631
VA+QAV++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2179 VAVQAVMALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +3
Query: 360 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 506
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P M
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCM 2177
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 497
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 498 PA 503
PA
Sbjct: 63 PA 64
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +2
Query: 521 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 634
+VL+ +A+GR+ G+V+DSG + VP+++GY L AI
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAI 108
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 425
D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 283 DFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 554 TGIVLDSGDGVSHTVPI 604
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 103 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 249
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 518 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 634
Q LSLYASG T G+ L SG + IYEG+ L H +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTL 805
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 231 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 115
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Frame = +2
Query: 512 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAIXXXXXXXXXXX 667
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 668 XXXMKILPER 697
++L ER
Sbjct: 100 FFVQQLLRER 109
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/87 (31%), Positives = 32/87 (36%)
Frame = +3
Query: 414 PVLLTEAPLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPT 593
P T P P T +T TP SP+ P P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 594 PCPSTKDTHFPTPFCVWT*PVATSQTT 674
TK T TP P A + TT
Sbjct: 88 TSTLTKPTPATTPTPTKPTPTAHTPTT 114
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 486 TFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPT 593
T TP +P+KP + P P + TP T +PT
Sbjct: 113 TTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +3
Query: 483 ETFNTPAM*SPSKPCSRCTRP----VVPPVSCWTPATVSPTPCPSTKDTHFPT 629
+T TPA +P+ P + P + P TP PTP T T PT
Sbjct: 66 QTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +3
Query: 414 PVLLTEAPLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSP- 590
P T P P +T+ T TP +P+KP P P + TP +P
Sbjct: 74 PTPTTPTPKTPTPTTSTLTKPTPAT--TP---TPTKPTPTAHTPTTPTPTAHTPTKPTPK 128
Query: 591 TPCPS--TKDTHFPT 629
TP P+ T H PT
Sbjct: 129 TPTPTTPTPTAHTPT 143
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +3
Query: 495 TPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHFPTPF 635
TP +P+ P P P TP T PTP T T PT F
Sbjct: 106 TPTAHTPTTPTPTAHTPTKPTPKTPTPTT--PTPTAHTPTTPTPTTF 150
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 435 PLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 611
P P +T+ +T TP +P+ P P + T T +P TP P+
Sbjct: 5 PTAPTLTTPTLTKATPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAP 64
Query: 612 DTHFPTP 632
PTP
Sbjct: 65 TQTTPTP 71
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +3
Query: 243 GRYGQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 404
GR G+ DS VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 405 EEHPVLLTEAPLNPKANRE 461
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 34.3 bits (75), Expect = 0.096
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 414 PVLLTEAPLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVV---PPVSCWTPATV 584
P L+T PL +T NTP + + + P T P+V PP+ TP V
Sbjct: 34 PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93
Query: 585 SPTPCPSTKDTHFPTPFCVWT*PVATSQTTS 677
+ TP T TPF V T P + T S
Sbjct: 94 TTTPLLVT-----TTPFLVTTTPPLVTTTPS 119
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 495 TPAM*SP-SKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHFPTP--FCVWT*PVAT 662
TPA SP + P +R P+ PP C + V PT P S+K + P+P FC ++ T
Sbjct: 315 TPAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPSTFCHYSTEKIT 373
Query: 663 SQTT 674
S T
Sbjct: 374 SSRT 377
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.3 bits (75), Expect = 0.096
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 267 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 389
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 121 EVAALVVDNGSGMCKAGFAGDDAPRAV 201
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 537 TRPVVPPVSCWTPATVSPTPCPSTKDTHFPTPFCVW 644
T P P T TV PT PS D F T C W
Sbjct: 1702 TNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_48166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 459 EKMTQIMFETFNTPAM*SPSKPCSR----CTRPVVPP-VSCWTPATVSPTPC 599
+K T + F TP++ + + P S T P VPP V+ P T +P PC
Sbjct: 188 DKQTDVCHLIFPTPSLGTQAPPPSTGGVTLTTPTVPPRVASTEPTTFTPKPC 239
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 432 APLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 605
A P A + + +NTP S P P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQ--APPTLPPTTLTTPSWSQPVPVPS 943
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 372 HTFYNELRVAPEEHP---VLLTEAPLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTR 542
H+ + + +P HP LL + +P + F T +T SPS P
Sbjct: 464 HSHPSPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFLTLSTKPCFSPSNPSPASH- 522
Query: 543 PVVPPVSCWTPATVSPTPC 599
+ P C+T T+SP PC
Sbjct: 523 --LSPKPCFTSLTLSPKPC 539
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 510 SPSKPCSRCTRPVVPPVSCWTPATVSPTPC 599
SPS+PC + P C+T T+SP PC
Sbjct: 676 SPSQPCPATH---LSPKPCFTFVTLSPKPC 702
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 486 TFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHFPTP 632
T T A +P+ P + T P P + TP T + TP P P
Sbjct: 123 TAPTTAATTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPP 171
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 513 PSKPCSRCTRPVVPP 557
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 SPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 611
SP KP T+PVVP P+ + P P PS+K
Sbjct: 1512 SPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +3
Query: 534 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHFP 626
CT+ +P +TP T TPC PST+ +H P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 513 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHFPTP 632
P P + TRP VP +T PTP P T P P
Sbjct: 924 PPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIP 963
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 588 ETPSPESSTIPVVRPDAYSESTAWMATTWRAC*MFRT*SGSSSLC 454
ETP+P + P PDA TAW+ R FRT S S C
Sbjct: 169 ETPTPALESAPAAMPDA--TDTAWVTAKARLY-FFRTCRPSPSRC 210
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -3
Query: 619 CVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDYMAGVLNVSNMIWVIFSLLALGL 440
CVSF D +T GVQ GG G V+R+ + +VS+ V++ L
Sbjct: 70 CVSFEDPFTGVETPLGVQQGGGGGGGGVKRKRDPE--------DVSDKDDVVYELRQTST 121
Query: 439 RGASVSRTGCS 407
+ ++ RT CS
Sbjct: 122 KRSTKMRTNCS 132
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 435 PLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKD 614
PL P +N + NTP +P S RP PP SC + TP P +
Sbjct: 56 PLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPP-SCQSNTPRPLTPPPRQSN 114
Query: 615 THFPTPF 635
T P +
Sbjct: 115 TTQPPAY 121
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -1
Query: 630 AWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 517
+W P T W +PSP+ T P ++T+W
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 621 SAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 517
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 513 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHFPTP 632
P+K RP V P+S + A ++PT T + P P
Sbjct: 317 PAKSSIDVARPPVVPISSHSAAPIAPTTTTKTTKSGLPEP 356
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 206 GNTARGASSPAKPALHIPEPLSTT 135
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +3
Query: 513 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHFPTPFCVWT*PV 656
PS P S PV V T T +PT C T + P C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/96 (29%), Positives = 37/96 (38%)
Frame = +3
Query: 387 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSC 566
E APE L E + P+A T ++ +T P + KP +P P
Sbjct: 227 ETTTAPETTMAL--ETTVAPEATMAPETTVVPDTTVEPETSTTLKPTDVTEKPEASPA-- 282
Query: 567 WTPATVSPTPCPSTKDTHFPTPFCVWT*PVATSQTT 674
TPA S TP + T P T ATS +T
Sbjct: 283 -TPAEYSTTPSVQPELTEAPQTDYPTTASPATSPST 317
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Frame = +3
Query: 372 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAM*SPSKPCSRCT 539
HT N AP HP L P+A M + ET P M +PS +
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 540 RPVVPPVSCWTPATVSPTPCPSTKDTHFPTP 632
PP S P PTP + P P
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPP 365
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +3
Query: 426 TEAPLNPKANR---EKMTQIMFETFNTPAM*SPSKPCSRCTRPVVPPVSCWTPA-----T 581
TEA +PKAN+ +K + + + A + PC+ P PPV PA
Sbjct: 1336 TEAGKHPKANKVGKDKHNKGTKKCYGACAPPPMADPCATMAAPCAPPVMMAAPAPMLAPM 1395
Query: 582 VSPTPCP 602
++P P P
Sbjct: 1396 LAPMPAP 1402
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +3
Query: 540 RPVVPPVSCWTPATVS---PTPCPSTKDTHFPT--PFCVWT*PVATSQTTS 677
+P PPV+ P T S PT P+T+ T PT P + T T TT+
Sbjct: 151 QPTEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTA 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,014,073
Number of Sequences: 59808
Number of extensions: 633233
Number of successful extensions: 2269
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2234
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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