Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0231
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050291-1|AAH50291.1|  547|Homo sapiens glucocorticoid induced ...    31   4.1  
AJ399810-1|CAC06625.1|  123|Homo sapiens immunoglobulin heavy ch...    31   5.5  
BC025719-1|AAH25719.1|  390|Homo sapiens matrix metallopeptidase...    30   9.6  
AL691432-6|CAM12835.1|  390|Homo sapiens matrix metallopeptidase...    30   9.6  
AJ005256-1|CAB38176.1|  390|Homo sapiens MMP-23 protein.               30   9.6  
AF056200-1|AAC62616.1|  390|Homo sapiens metalloprotease mmp21/2...    30   9.6  
AF055334-1|AAC63527.1|  390|Homo sapiens metalloprotease isoform...    30   9.6  
AB031068-1|BAA92769.1|  390|Homo sapiens MIFR/Femalysin protein.       30   9.6  
AB010961-1|BAA24833.1|  390|Homo sapiens MIFR-1 protein.               30   9.6  

>BC050291-1|AAH50291.1|  547|Homo sapiens glucocorticoid induced
           transcript 1 protein.
          Length = 547

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = -2

Query: 309 RAESQEV-LPAVIRVNVSNCIK*FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGET 133
           +A+SQ+V   + IR   S      P L G  P D   +Y SC   +  QT +  C+A E 
Sbjct: 155 KAKSQQVRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPS--CWAEEG 212

Query: 132 GEKVVHTRADSQDALPPVFQQL 67
            EK  H R+ S  +   + +Q+
Sbjct: 213 AEKRSHQRSASWGSADQLKEQI 234


>AJ399810-1|CAC06625.1|  123|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 123

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -2

Query: 489 LTAHLVLSGYWSP*TSVYKVNAATHLEI*VLTSQYSYNGCHTLET 355
           +TA+L LSG  S  T+VY   A T ++I V  S + Y G  TL T
Sbjct: 77  ITAYLELSGLTSDDTAVYYC-ATTRMKITVFASTFDYWGQGTLVT 120


>BC025719-1|AAH25719.1|  390|Homo sapiens matrix metallopeptidase
           23B protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AL691432-6|CAM12835.1|  390|Homo sapiens matrix metallopeptidase
           23B protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AJ005256-1|CAB38176.1|  390|Homo sapiens MMP-23 protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AF056200-1|AAC62616.1|  390|Homo sapiens metalloprotease mmp21/22A
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AF055334-1|AAC63527.1|  390|Homo sapiens metalloprotease isoform A
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AB031068-1|BAA92769.1|  390|Homo sapiens MIFR/Femalysin protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


>AB010961-1|BAA24833.1|  390|Homo sapiens MIFR-1 protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 243 FPELCGHLP*DVRSNYRSCNNYQTLQTETHYCYAGETGE 127
           F E+    P D+R  +   N+   L +  H+C+ G TGE
Sbjct: 129 FREVAPEQPSDLRIGFYPINHTDCLVSALHHCFDGPTGE 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,976,766
Number of Sequences: 237096
Number of extensions: 2106305
Number of successful extensions: 3450
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3450
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)