Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0230
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.2  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 119 MRAFVV--LACVAMAYGRPEPPVGYSY 193
           MR FV+  +ACV++A  RPE      Y
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKY 27


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 219 ASALPLSAADTECCYWWSFWIPRW 290
           + AL  +  D   CYW ++   RW
Sbjct: 15  SGALVSATTDKVVCYWGTWSTYRW 38


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 47  LIGY*INYHRVS 82
           L+GY INY R+S
Sbjct: 112 LLGYSINYRRIS 123


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 590 GASRSGRSWGLDEDDLV 540
           G    GR+W +DED  +
Sbjct: 288 GIPAYGRAWKMDEDSSI 304


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 460 IYVHVPPPEPVEQRLPLS 513
           IY   PPP P     P+S
Sbjct: 6   IYEESPPPAPQSAATPIS 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,686
Number of Sequences: 336
Number of extensions: 2242
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)