Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0229
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.013
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.12 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.85 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 106 HLYFILKVFHSYCCNFIKKTCIFYFVSCFI 17
           HL F+L +++ YC   I   CI+YF   FI
Sbjct: 278 HLLFLLCIYYFYCALIIL-LCIYYFCRAFI 306



 Score = 25.8 bits (54), Expect = 0.37
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 106 HLYFILKVFHSYCCNFIKKTCIFYFVSCFIY 14
           HL F+L ++H +C  FI  T    F   FI+
Sbjct: 159 HLLFLLCIYHFFCA-FIIFTMHLLFCCAFIF 188



 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 106 HLYFILKVFHSYCCNFIKKTCIFYFVSCFIYIFSV 2
           HL F+L + + +  + +   CI+YF S FI IF++
Sbjct: 192 HLLFLLCLDY-FTLHLLFLPCIYYFYSAFI-IFTI 224



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 103 LYFILKVFHSYCCNFIKKTCIFYFVSCFIYIF 8
           +Y+   +   +CC FI  T    F+ C  Y +
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFY 289



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 97  FILKVFHS-YCCNFIKKTCIFYFVSCFIYIFSV 2
           FI+   H  + C  I   CI+YF   FI +F+V
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAFI-LFTV 250


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -3

Query: 180  FGRLIVGNRHLKTSLESISDI*SVPTCILF*KSFIVI 70
            FG+L   + HL   ++S ++I  VP  + F  +F++I
Sbjct: 1301 FGKLCSLHHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -3

Query: 180 FGRLIVGNRHLKTSLESISDI*SVPTCILF*KSFIVIV 67
           F ++   ++HL  S++  +++  V   +LF  SF+ IV
Sbjct: 223 FSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNSFLSIV 260



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/46 (21%), Positives = 22/46 (47%)
 Frame = -3

Query: 207 CTGTSGLTIFGRLIVGNRHLKTSLESISDI*SVPTCILF*KSFIVI 70
           C   +   + GR+   + HL   +   ++I  +   ++F  SF++I
Sbjct: 566 CATKAQSVVLGRICTLHHHLSKLVTRFNEIFGLGLLLMFGVSFLLI 611


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -3

Query: 180 FGRLIVGNRHLKTSLESISDI*SVPTCILF*KSFIVIV 67
           F ++   ++HL  S++  +++  V   +LF  SF+ IV
Sbjct: 241 FSKICYLHQHLSKSVKLFNEVFGVSLLVLFGNSFLSIV 278


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +3

Query: 222 QNIIYTFYALYNYN-----NSYGYINCYNP 296
           Q + Y ++   NYN     N YGY N Y+P
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGYGNYYHP 87


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +3

Query: 222 QNIIYTFYALYNYN-----NSYGYINCYNP 296
           Q + Y ++   NYN     N YGY N Y+P
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGYGNYYHP 87


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +3

Query: 222 QNIIYTFYALYNYN-----NSYGYINCYNP 296
           Q + Y ++   NYN     N YGY N Y+P
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGYGNYYHP 87


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +3

Query: 222 QNIIYTFYALYNYN-----NSYGYINCYNP 296
           Q + Y ++   NYN     N YGY N Y+P
Sbjct: 58  QQLQYGYHNHQNYNSNVLSNGYGYGNYYHP 87


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 300 HVDCNSLCS--RNCYYSYIKRKMCILYFVIFSL 208
           HVD + + +  R  Y   +KR   I+ FV+FSL
Sbjct: 125 HVDVSFIKAGFRLEYKQLLKRSYLIISFVLFSL 157


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 300 HVDCNSLCS--RNCYYSYIKRKMCILYFVIFSL 208
           HVD + + +  R  Y   +KR   I+ FV+FSL
Sbjct: 125 HVDVSFIKAGFRLEYKQLLKRSYLIISFVLFSL 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,952
Number of Sequences: 336
Number of extensions: 4035
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)