Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0229
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 24 1.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 1.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 5.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 5.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 7.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 7.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 7.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.2
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 252 YNYNNSY-GYINCYN 293
YNYNN+Y Y N YN
Sbjct: 92 YNYNNNYNNYNNNYN 106
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 252 YNYNNSYGYIN 284
YNYNN Y Y N
Sbjct: 98 YNYNNKYNYNN 108
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 92 YNYNNNY---NNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 325 YNYNNNY---NNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 252 YNYNNSYGYINCYNPHD 302
YNYNN+Y N YN H+
Sbjct: 325 YNYNNNY---NNYNKHN 338
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 234 YTFYALYNYNNSYGYINCYN 293
Y + NYNN+Y N YN
Sbjct: 322 YKYSNYNNYNNNYNNYNNYN 341
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.3
Identities = 5/14 (35%), Positives = 12/14 (85%)
Frame = -2
Query: 250 KA*NVYIIFCYIFI 209
KA ++Y++ C++F+
Sbjct: 302 KAIDIYLVMCFVFV 315
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 522 LDEPLKGPQLSVNISRTRGHGEAHSLSQ 605
LDE +K P SV+ + + GE SL++
Sbjct: 482 LDEAVKSPLGSVSSTESTCSGEVASLTE 509
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -3
Query: 723 LCATAFSVAQPNIKEHSVEHFDNYFGVL 640
+C+TA + N+ ++ E FD++ G L
Sbjct: 503 ICSTATPMMVINMLQNLYEQFDSFCGQL 530
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 594 SLSQLKMFDRYNKFCSAPQNNYRNAPQN 677
SLS + YN + + NNY N N
Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNN 111
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 594 SLSQLKMFDRYNKFCSAPQNNYRNAPQN 677
SLS + YN + + NNY N N
Sbjct: 84 SLSNNYKYSNYNNYNNNYNNNYNNNYNN 111
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 594 SLSQLKMFDRYNKFCSAPQNNYRN 665
SLS + YN + + NNY N
Sbjct: 317 SLSNNYKYSNYNNYNNYNNNNYNN 340
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 201 RYIMKI*QNIIYTFYALYNYNNSYGYINCYN 293
+ I + N I+ YNYNN+ N YN
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYN 109
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 201 RYIMKI*QNIIYTFYALYNYNNSYGYINCYN 293
+ I + N I+ YNYNN+ N YN
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYN 109
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,811
Number of Sequences: 438
Number of extensions: 4814
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -