Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0228
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4T169 Cluster: Chromosome undetermined SCAF10703, whol...    36   0.95 
UniRef50_UPI0000018BD6 Cluster: Hyaluronidase-1 precursor (EC 3....    34   3.8  
UniRef50_Q7RRA7 Cluster: Putative uncharacterized protein PY0082...    33   6.7  

>UniRef50_Q4T169 Cluster: Chromosome undetermined SCAF10703, whole
           genome shotgun sequence; n=2; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF10703,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 358

 Score = 35.9 bits (79), Expect = 0.95
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -2

Query: 669 CIDIRDIDISKYRNNDYRSQRQLIQC*TKVGLFAFY*REG 550
           C+D+RD DI + R  D++ Q+  I     +G++ F  REG
Sbjct: 13  CLDLRDFDIVENRRQDFQGQKMTIFYRDHLGMYPFISREG 52


>UniRef50_UPI0000018BD6 Cluster: Hyaluronidase-1 precursor (EC
           3.2.1.35) (Hyal-1) (Hyaluronoglucosaminidase-1)
           (LUCA-1).; n=3; Clupeocephala|Rep: Hyaluronidase-1
           precursor (EC 3.2.1.35) (Hyal-1)
           (Hyaluronoglucosaminidase-1) (LUCA-1). - Takifugu
           rubripes
          Length = 408

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 666 IDIRDIDISKYRNNDYRSQRQLIQC*TKVGLFAFY*REG 550
           +D+RD DI + R  D+R Q+  I     +G++ F  REG
Sbjct: 49  LDLRDFDIVENRQQDFRGQKMTIFYRDHLGMYPFISREG 87


>UniRef50_Q7RRA7 Cluster: Putative uncharacterized protein PY00824;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY00824 - Plasmodium yoelii
           yoelii
          Length = 369

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 210 VYFCPFSDVKATIRYTKILPVWPKDLGSYYCFCCEAIISILRVGQPLNNTSSTSCVI 380
           VY C F +   +    +ILP+ P D   + CFC   I  I+   +  N T+S  CV+
Sbjct: 124 VYICKFCNATYSQLDAQILPLDPYD-AHFLCFCNNKIELIIYKEESKNVTASCYCVL 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,079,511
Number of Sequences: 1657284
Number of extensions: 12900972
Number of successful extensions: 27598
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27593
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)