Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0227
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 30 1.5
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 30 1.5
U97194-2|AAN84846.1| 806|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
U97194-1|AAK68236.1| 788|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative MAP-... 30 1.9
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical p... 29 3.4
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 29 4.5
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 29 4.5
U97015-3|AAB52343.1| 124|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid deplete... 28 5.9
AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical ... 28 7.8
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Frame = -2
Query: 496 SEAESDDVP-----EYQNFHAT-----NNYIPVPKPRLRTRYEDKPNEIHEVKV 365
SE+E D P EY+NFH + Y P+PKP +R ++E H K+
Sbjct: 310 SESEDDGCPAHLIGEYRNFHKILLEEPSFYRPLPKPEIRKKFEPMQKLKHAGKL 363
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Frame = -2
Query: 496 SEAESDDVP-----EYQNFHAT-----NNYIPVPKPRLRTRYEDKPNEIHEVKV 365
SE+E D P EY+NFH + Y P+PKP +R ++E H K+
Sbjct: 310 SESEDDGCPAHLIGEYRNFHKILLEEPSFYRPLPKPEIRKKFEPMQKLKHAGKL 363
>U97194-2|AAN84846.1| 806|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform b protein.
Length = 806
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -2
Query: 547 YLSIC*-TNSASLKSVCNSEAESDDVPEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEV 371
Y SIC T+ +SL++ NS DD+P +P+ P + YED ++ E
Sbjct: 462 YESICTQTSISSLETQNNSTQIDDDLPPMPQMPILKKEVPIKTP-IGNVYEDLSDDDSET 520
Query: 370 KVLKPIIEHERSETNDYVKSI 308
K +++ S + V ++
Sbjct: 521 KPTDLVLKTPSSSASSAVATL 541
>U97194-1|AAK68236.1| 788|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 21,
isoform a protein.
Length = 788
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -2
Query: 547 YLSIC*-TNSASLKSVCNSEAESDDVPEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEV 371
Y SIC T+ +SL++ NS DD+P +P+ P + YED ++ E
Sbjct: 444 YESICTQTSISSLETQNNSTQIDDDLPPMPQMPILKKEVPIKTP-IGNVYEDLSDDDSET 502
Query: 370 KVLKPIIEHERSETNDYVKSI 308
K +++ S + V ++
Sbjct: 503 KPTDLVLKTPSSSASSAVATL 523
>AF170425-1|AAF89696.1| 788|Caenorhabditis elegans putative
MAP-like protein protein.
Length = 788
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -2
Query: 547 YLSIC*-TNSASLKSVCNSEAESDDVPEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEV 371
Y SIC T+ +SL++ NS DD+P +P+ P + YED ++ E
Sbjct: 444 YESICTQTSISSLETQNNSTQIDDDLPPMPQMPILKKEVPIKTP-IGNVYEDLSDDDSET 502
Query: 370 KVLKPIIEHERSETNDYVKSI 308
K +++ S + V ++
Sbjct: 503 KPTDLVLKTPSSSASSAVATL 523
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 472 PEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEVKVLKPIIEHERSETNDYVKSITRRSK 293
P Y IP+P ++ T Y P E+ ++P +++ R D+V S R +
Sbjct: 229 PSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQ--FTVQPKVKNLREMDEDHVGSWVRDQQ 286
Query: 292 SRRQEHTA 269
S + H A
Sbjct: 287 SIDRGHEA 294
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 472 PEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEVKVLKPIIEHERSETNDYVKSITRRSK 293
P Y IP+P ++ T Y P E+ ++P +++ R D+V S R +
Sbjct: 229 PSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQ--FTVQPKVKNLREMDEDHVGSWVRDQQ 286
Query: 292 SRRQEHTA 269
S + H A
Sbjct: 287 SIDRGHEA 294
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 472 PEYQNFHATNNYIPVPKPRLRTRYEDKPNEIHEVKVLKPIIEHERSETNDYVKSITRRSK 293
P Y IP+P ++ T Y P E+ ++P +++ R D+V S R +
Sbjct: 223 PSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQ--FTVQPKVKNLREMDEDHVGSWVRDQQ 280
Query: 292 SRRQEHTA 269
S + H A
Sbjct: 281 SIDRGHEA 288
>Z75955-10|CAB00124.2| 410|Caenorhabditis elegans Hypothetical
protein R07B7.15 protein.
Length = 410
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = -3
Query: 531 RLIQQVSKAFAIVKLNLMTYLNIKTSMLPTTISQFLSLDFVQDMKI 394
+++Q+V +AF +KLN + YL +K + T ++ +S F QD KI
Sbjct: 294 KIVQRVLRAFLRIKLNDVEYLFLK---VITILNPAVSDLFAQDQKI 336
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 546 IFQSVRLIQQVSKAFAIVKLNLMTYLNIKTSMLPTTIS-QFLSLDF 412
+ QSV LI Q A ++ + LNI T LPTT+ Q + LDF
Sbjct: 63 LIQSVSLITQPGDASKSLETSYDDKLNILTIKLPTTMQPQKVQLDF 108
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 546 IFQSVRLIQQVSKAFAIVKLNLMTYLNIKTSMLPTTIS-QFLSLDF 412
+ QSV LI Q A ++ + LNI T LPTT+ Q + LDF
Sbjct: 127 LIQSVSLITQPGDASKSLETSYDDKLNILTIKLPTTMQPQKVQLDF 172
>U97015-3|AAB52343.1| 124|Caenorhabditis elegans Hypothetical
protein F48C1.5 protein.
Length = 124
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -2
Query: 454 HATNNYIPVPKPRLRTRYEDKPNEIHEVKVLKPIIEHERSETNDYVKSITRRSKSRRQEH 275
H NYIP PK + R + E VK EH SE++D ++ + S S +Q
Sbjct: 62 HLEKNYIPKPKETTKKR---RAGEAGGVK-----REHSTSESDDQLEDANQPSTSSQQSS 113
Query: 274 TASANRS 254
+ R+
Sbjct: 114 SRKKQRN 120
>AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid depleted
protein 2 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 487 ESDDVPEYQNFHATNNYIPVPK-PRLRTRYEDKPNEIHEV--KVLKPIIEHERSETNDYV 317
E D+ P Q A + L+ +Y D P EI E+ K + E ER E +++
Sbjct: 172 EEDEAPNKQQEKAKRRAMQSSLIMELKNQYSDAPEEIREMSEKKYQYDRERERYEEDNFT 231
Query: 316 KSITRRSKSRRQE 278
+ + + RR E
Sbjct: 232 RIRLNKDQKRRSE 244
>AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical
protein Y27F2A.6 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/80 (23%), Positives = 36/80 (45%)
Frame = -3
Query: 606 EDTESKIFKSNLSEDSAIEDIFQSVRLIQQVSKAFAIVKLNLMTYLNIKTSMLPTTISQF 427
E ++++ K L+E+S + + +S+ + Q + + LNL+ + S TIS
Sbjct: 331 EIMKNRVEKQKLAEESEMAKLKKSLEGVSQANSDLKMKNLNLLIETSDLKSKSEHTISTS 390
Query: 426 LSLDFVQDMKINLTKSTKSK 367
V + + TKSK
Sbjct: 391 EHQKIVSKLHAEIENLTKSK 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,435,685
Number of Sequences: 27780
Number of extensions: 308570
Number of successful extensions: 1123
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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