Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0225
         (338 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0514 - 24477720-24479915                                         27   2.8  
11_02_0038 - 7631462-7634428,7635975-7636250                           27   2.8  
08_02_0684 + 20031661-20031957,20032094-20032512,20033600-200336...    27   5.0  
07_03_1670 - 28505732-28506426,28508202-28509309                       27   5.0  
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038     26   6.6  
09_04_0327 + 16700235-16700312,16701756-16701978,16702488-167027...    26   8.7  
06_03_1145 - 28000012-28000022,28000119-28000290,28000381-280004...    26   8.7  

>11_06_0514 - 24477720-24479915
          Length = 731

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 328 GCLVICPRATVCLRRLCASAMA 263
           GC + C  ++ CLR LC S+ A
Sbjct: 522 GCCISCSSSSKCLRCLCVSSSA 543


>11_02_0038 - 7631462-7634428,7635975-7636250
          Length = 1080

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 73  LSYESSNLKRENQLYGLRVLCINFLIKM--IPLALFVLGAILATTE 204
           L ++S N+K E ++  L+ +    + K   +PLA+ V+ ++LAT E
Sbjct: 415 LLWKSMNIKEEKEVETLQHIGTKIVSKCGGLPLAIKVIASVLATKE 460


>08_02_0684 +
           20031661-20031957,20032094-20032512,20033600-20033606,
           20033905-20033982,20034086-20034121
          Length = 278

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 337 AAGGCLVICPRATVCLRRLCASAMACFY 254
           A G C +I P A + LRRL    +A F+
Sbjct: 201 AVGHCCLIIPYAVLRLRRLARKKVASFF 228


>07_03_1670 - 28505732-28506426,28508202-28509309
          Length = 600

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +1

Query: 124 RVLCINFLIKMIPLALFVLGAILATTEGCGSRKQLLKSGGLTAYRNRPLRTHTTV*DRLL 303
           R +C++ L  +  LA   L  +++   G  +      S   T+Y  RP +  T   DRL 
Sbjct: 78  RDVCVSTLSTIPNLARKPLRDVISEVVGRAASAVRASSSNCTSYLQRPRQLRTR--DRLA 135

Query: 304 LSDKL 318
           LSD L
Sbjct: 136 LSDCL 140


>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
          Length = 237

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 233 FNNCFLEPQPSVVARIAPKTNNAKGIILIKKFIHNTLRP 117
           F  CF  P PS  A +AP+   ++G   + +  H+ L P
Sbjct: 78  FPRCFTPPAPSFSAGVAPEPAYSRG--KLYRLPHDPLHP 114


>09_04_0327 +
           16700235-16700312,16701756-16701978,16702488-16702730,
           16702815-16702865,16702965-16703225,16703319-16703371,
           16703446-16703815,16703906-16704750
          Length = 707

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 58  APYYILSYESSNLKRENQLYGLRVLCI 138
           +PYYI+ +   N ++  QL G  VLCI
Sbjct: 258 SPYYIVHFFLRNKRQGWQLLGGTVLCI 284


>06_03_1145 -
           28000012-28000022,28000119-28000290,28000381-28000488,
           28000578-28002152
          Length = 621

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 63  WCSLVITKRSTFFLINLKF 7
           WCSL   K+ +F L+ LK+
Sbjct: 347 WCSLASEKQDSFRLVGLKY 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,389,666
Number of Sequences: 37544
Number of extensions: 141912
Number of successful extensions: 331
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)