Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0225
         (338 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR450333-1|CAG29329.1|  272|Homo sapiens TGIF protein.                 28   6.4  
AF179900-1|AAF81643.1|  272|Homo sapiens TALE homeobox TG-intera...    28   6.4  

>CR450333-1|CAG29329.1|  272|Homo sapiens TGIF protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/63 (23%), Positives = 39/63 (61%)
 Frame = -1

Query: 314 LSESNSLSQTVVCVRNGLFL*AVKPPDFNNCFLEPQPSVVARIAPKTNNAKGIILIKKFI 135
           +SE++S+ ++V+ ++N  F+ A++   F++C   P P++   ++PK +++  ++     I
Sbjct: 117 ISETSSV-ESVMGIKN--FMPALEETPFHSCTAGPNPTLGRPLSPKPSSSGSVLARPSVI 173

Query: 134 HNT 126
            +T
Sbjct: 174 CHT 176


>AF179900-1|AAF81643.1|  272|Homo sapiens TALE homeobox
           TG-interacting factor protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/63 (23%), Positives = 39/63 (61%)
 Frame = -1

Query: 314 LSESNSLSQTVVCVRNGLFL*AVKPPDFNNCFLEPQPSVVARIAPKTNNAKGIILIKKFI 135
           +SE++S+ ++V+ ++N  F+ A++   F++C   P P++   ++PK +++  ++     I
Sbjct: 117 ISETSSV-ESVMGIKN--FMPALEETPFHSCTAGPNPTLGRPLSPKPSSSGSVLARPSVI 173

Query: 134 HNT 126
            +T
Sbjct: 174 CHT 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,499,881
Number of Sequences: 237096
Number of extensions: 764783
Number of successful extensions: 5197
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)