Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0224
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       25   2.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.2  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   8.2  

>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 132 THSIHVFYGRPLPPLPCNTIFIHLLVTCIFSLRITCPYHTTYRFYLSIQ 278
           T ++ VF+ +P P    +T+  HL    I S+    P  T    Y  +Q
Sbjct: 212 TSNVSVFFLKPSPDTDVSTLETHLRNQSISSVLKLFPDETVRSAYTEVQ 260


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 552 QNSAPPFAASTRSLGIDSL 496
           +N+ PP+AA  R LG++ L
Sbjct: 938 RNNLPPYAARCRLLGLEPL 956


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -1

Query: 552 QNSAPPFAASTRSLGIDSLINVFRSIVVAFDSRQRTAIIKRSIFFLKLQNNPERKLTSSI 373
           Q S PP  AST    IDS  +  R+ VV    +        +  ++    NP R++   I
Sbjct: 89  QGSFPPELASTPLEDIDSFYSNQRTFVVISKGKDIFRFSATNALYVLDPFNPIRRVAIYI 148

Query: 372 L 370
           L
Sbjct: 149 L 149


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
 Frame = +2

Query: 386 NFRSGLFCNFRKKIERLI---------IAVLCLESKATTMERKTLISES 505
           NFR  +F  F+K+ +R I         +    L S  + M R T IS++
Sbjct: 435 NFRKAIFGMFQKRSQRQINLEHTSGTQVTEFVLRSNGSKMRRNTTISDT 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,204
Number of Sequences: 2352
Number of extensions: 10651
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)