Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0224
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    28   4.9  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    28   4.9  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +2

Query: 299 SQNLHKCLFASPALSQVFLEPLFLKIELVNFRSGLFCNFRKKIERLIIAVLCLE 460
           +Q +HKC F    +S+   E + ++ E+V  R+    +  K++E+L+I V  L+
Sbjct: 61  AQMMHKCQFMMHTISKQEKEMITMRAEVVEARAAR-QSMEKEVEQLMIQVHSLQ 113


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +2

Query: 299 SQNLHKCLFASPALSQVFLEPLFLKIELVNFRSGLFCNFRKKIERLIIAVLCLE 460
           +Q +HKC F    +S+   E + ++ E+V  R+    +  K++E+L+I V  L+
Sbjct: 83  AQMMHKCQFMMHTISKQEKEMITMRAEVVEARAAR-QSMEKEVEQLMIQVHSLQ 135


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +2

Query: 299 SQNLHKCLFASPALSQVFLEPLFLKIELVNFRSGLFCNFRKKIERLIIAVLCLE 460
           +Q +HKC F    +S+   E + ++ E+V  R+    +  K++E+L+I V  L+
Sbjct: 85  AQMMHKCQFMMHTISKQEKEMITMRAEVVEARAAR-QSMEKEVEQLMIQVHSLQ 137


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 247 WYGHVMRREKMHVTRRCMKMVLQGKGGRGRP*KTWMECVN-DDMRERGVSVEMT 89
           W G +  R    V RR       G+GG  RP  T  +C N DD +ER   +E T
Sbjct: 823 WCGCMRCRPGKEVRRRFCDRSPIGRGGPMRPDST-CDCGNGDDSQERSCPMEQT 875


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 247 WYGHVMRREKMHVTRRCMKMVLQGKGGRGRP*KTWMECVN-DDMRERGVSVEMT 89
           W G +  R    V RR       G+GG  RP  T  +C N DD +ER   +E T
Sbjct: 823 WCGCMRCRPGKEVRRRFCDRSPIGRGGPMRPDST-CDCGNGDDSQERSCPMEQT 875


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 129 FTHSIHVFYGRPLPPLPCNTIFIHLLVTCIFSLRITCPYHTTYR--FYLSIQKLSE 290
           + H   +FYG P PP P     +HL V C     ++CP  TT R  FY + + L +
Sbjct: 693 YHHQHKIFYGSPTPP-P-----MHLPVLC----GVSCPSMTTERSIFYRATRALRQ 738


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,686,840
Number of Sequences: 27780
Number of extensions: 241912
Number of successful extensions: 569
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)