Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0223
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 41 0.034
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 40 0.078
UniRef50_UPI0000DD7A63 Cluster: PREDICTED: hypothetical protein;... 38 0.31
UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1... 37 0.41
UniRef50_A7R781 Cluster: Chromosome undetermined scaffold_1609, ... 37 0.55
UniRef50_Q0TXZ4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.96
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 36 1.3
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 36 1.3
UniRef50_O43166 Cluster: Signal-induced proliferation-associated... 36 1.3
UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3; Eukary... 35 1.7
UniRef50_A1G027 Cluster: OmpA/MotB precursor; n=1; Stenotrophomo... 35 2.2
UniRef50_UPI0000DB7A1D Cluster: PREDICTED: similar to osa CG7467... 34 2.9
UniRef50_Q6ZWJ8 Cluster: Cysteine-rich BMP regulator 2; n=16; Eu... 33 5.1
UniRef50_Q4PDK8 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q8CJW4 Cluster: Putative uncharacterized protein SCO350... 33 6.7
UniRef50_A6PQJ2 Cluster: Putative uncharacterized protein precur... 33 6.7
UniRef50_A7S489 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.7
UniRef50_A5KCP6 Cluster: Tryptophan/threonine-rich antigen; n=1;... 33 6.7
UniRef50_Q2GSS9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q1DX43 Cluster: Protein transport protein SEC31; n=6; P... 33 6.7
UniRef50_Q67GM1 Cluster: AdeD; n=1; Acinetobacter sp. 4365|Rep: ... 33 8.9
UniRef50_Q01YP9 Cluster: Type I phosphodiesterase/nucleotide pyr... 33 8.9
UniRef50_A3ERR2 Cluster: Uncharacterized conserved protein; n=1;... 33 8.9
UniRef50_A7PJU8 Cluster: Chromosome chr12 scaffold_18, whole gen... 33 8.9
UniRef50_P50745 Cluster: SH2B adapter protein 3; n=3; Rattus nor... 33 8.9
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 40.7 bits (91), Expect = 0.034
Identities = 55/143 (38%), Positives = 68/143 (47%)
Frame = +1
Query: 250 KTSGGGKTDSFNTFFKPKTGKLAKHRTPCCLRPIXXXXXXMRVPHWAHTRQVVSSKNKLI 429
KT GGG DSFNTFF +TG KH P R + + + + V ++LI
Sbjct: 41 KTLGGGD-DSFNTFFS-ETG-AGKH-VP---RAVFVDLEPTVIAN-LKIKNVYVVLDELI 92
Query: 430 TWVRERCRANNYCPVGHYTIGKGKIRRFGFWDKKSRKLA*PSVPGLARGFLDLPLLRVGG 609
T + ANNY GHYTIGK I + RKLA GL +GF L GG
Sbjct: 93 TGKED--AANNYAR-GHYTIGKEII---DLVLDRIRKLA-DQCTGL-QGF--LVFHSFGG 142
Query: 610 YRALGFTSLLDGKPSLRLDYGQR 678
GFTSLL L +DYG++
Sbjct: 143 GTGSGFTSLL--MERLSVDYGKK 163
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 39.5 bits (88), Expect = 0.078
Identities = 52/145 (35%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Frame = +1
Query: 250 KTSGGGKTDSFNTFFKPK-TGKLAKHRTPCCLRP-IXXXXXXMRVPHWAHTRQVVSSKNK 423
KT GGG DSFNTFF GK L P + H Q+++ K
Sbjct: 40 KTIGGGD-DSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKED 98
Query: 424 LITWVRERCRANNYCPVGHYTIGKGKIRRFGFWDKKSRKLA*PSVPGLARGFLDLPLLRV 603
ANNY GHYTIGK I + RKLA GL +GF L
Sbjct: 99 A---------ANNYAR-GHYTIGKEII---DLVLDRIRKLA-DQCTGL-QGF--LVFHSF 141
Query: 604 GGYRALGFTSLLDGKPSLRLDYGQR 678
GG GFTSLL L +DYG++
Sbjct: 142 GGGTGSGFTSLL--MERLSVDYGKK 164
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +3
Query: 225 DGPRCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSDLEPTVVDEGPALGTYK 398
DG + P DK IGG +D F F + AGK P DLEPTV+DE GTY+
Sbjct: 33 DG-QMPSDKTIGGGDDSFNTFF---SETGAGK-HVPRAVFVDLEPTVIDE-VRTGTYR 84
>UniRef50_UPI0000DD7A63 Cluster: PREDICTED: hypothetical protein;
n=3; Catarrhini|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 300
Score = 37.5 bits (83), Expect = 0.31
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -3
Query: 300 RLEESVERIGLPTP----RCLCLVGILAHQGLGMPCFPRASKASPKQGIYPDSGNFPGFG 133
RL+ES+ RI P P C C G+ G + FP SP++GI P+ G
Sbjct: 91 RLQESLHRIAWPRPLLDFTCRCGPGV---GGRRLSSFPHPPALSPERGIEPERGEGVSSS 147
Query: 132 PKPWYQEEWPLPP 94
K + +PL P
Sbjct: 148 SKTPIHDSYPLTP 160
>UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1;
Bos taurus|Rep: Similar to alpha-tubulin isoform 1 - Bos
taurus (Bovine)
Length = 99
Score = 37.1 bits (82), Expect = 0.41
Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 192 LPLGS-TASQALDGP--RCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSDLEPT 362
+P GS TA P RC K IGG +D F F + AGK P DLEPT
Sbjct: 18 MPAGSSTAWNTAFSPMARCQVTKTIGGGDDSFNTFF---SETGAGKH-VPRAVFVDLEPT 73
Query: 363 VVDEGPALGTYKTS 404
V+DE GTY++S
Sbjct: 74 VIDE-VRTGTYRSS 86
>UniRef50_A7R781 Cluster: Chromosome undetermined scaffold_1609,
whole genome shotgun sequence; n=53; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1609, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 111
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 138 SPGSSQNPGKCP--AWGKLYLPLGSTASQALDG-PRCPQDKDI 257
SP S+ P + P A G+ +PLGS QAL G PRCP ++ I
Sbjct: 43 SPPPSEGPSRLPPHAGGRPQIPLGSLPQQALPGEPRCPLEQRI 85
>UniRef50_Q0TXZ4 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 707
Score = 35.9 bits (79), Expect = 0.96
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 665 SKRRDGFPSNKEV--NPRARYPPTRRSGRSRNPLARPG 558
S+R PS ++ NP + P +GRSRNP ARPG
Sbjct: 475 SRRNRKAPSASQIRKNPEGGFAPQHGNGRSRNPFARPG 512
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +3
Query: 225 DGPRCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSDLEPTVVDEGPALGTYK 398
DG + P DK IGG +D F F + AGK P DLEPTV+DE GTY+
Sbjct: 38 DG-QMPSDKTIGGGDDSFNTFF---SETGAGK-HVPRAVFVDLEPTVIDE-VRTGTYR 89
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +3
Query: 225 DGPRCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSDLEPTVVDEGPALGTYK 398
DG + P DK IGG +D F F + AGK P DLEPTV+DE GTY+
Sbjct: 33 DG-QMPSDKTIGGGDDSFNTFF---SETGAGK-HVPRAVFVDLEPTVIDE-VRTGTYR 84
>UniRef50_O43166 Cluster: Signal-induced proliferation-associated
1-like protein 1; n=26; Tetrapoda|Rep: Signal-induced
proliferation-associated 1-like protein 1 - Homo sapiens
(Human)
Length = 1804
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/98 (22%), Positives = 37/98 (37%)
Frame = -3
Query: 693 QVLDFPLPVVQTERRLPIQ*GSEPQSPVPSHPKEWKIKESPCKTRYTWSSELAGFLVPKP 514
+++D P ++++ S PQSP PS P + ++S+ F +
Sbjct: 1543 KLIDLESPTPESQKSFKFHALSSPQSPFPSTPTSRRALHRTLSDESIYNSQREHFFTSRA 1602
Query: 513 KSTDFPFPNGVVTHGAIVVGPASFPYPSNKFVLG*NNL 400
D PN V+ P S P + LG +L
Sbjct: 1603 SLLDQALPNDVLFSSTYPSLPKSLPLRRPSYTLGMKSL 1640
>UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3;
Eukaryota|Rep: Alpha-tubulin-like protein - Solanum
tuberosum (Potato)
Length = 237
Score = 35.1 bits (77), Expect = 1.7
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +3
Query: 225 DGPRCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSDLEPTVVDEGPALGTYK 398
DG + P DK +GG +D F F + AGK P DLEPTV+DE GTY+
Sbjct: 33 DG-QMPSDKTVGGGDDAFNTFF---SETGAGK-HVPRAVFVDLEPTVIDE-VRTGTYR 84
>UniRef50_A1G027 Cluster: OmpA/MotB precursor; n=1; Stenotrophomonas
maltophilia R551-3|Rep: OmpA/MotB precursor -
Stenotrophomonas maltophilia R551-3
Length = 278
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -3
Query: 204 FPRASKASPKQGIYPDSGNFPGFGP 130
FP ASKAS K+GIYPD + F P
Sbjct: 46 FPEASKASLKEGIYPDVADLRRFAP 70
>UniRef50_UPI0000DB7A1D Cluster: PREDICTED: similar to osa
CG7467-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to osa CG7467-PA, isoform A - Apis
mellifera
Length = 2087
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = -3
Query: 153 GNFPGFGPKPWYQEEWPL--PPAI 88
GN+PG GP+P YQ+ WP+ PP +
Sbjct: 244 GNYPGMGPEP-YQQPWPIQRPPVV 266
>UniRef50_Q6ZWJ8 Cluster: Cysteine-rich BMP regulator 2; n=16;
Eutheria|Rep: Cysteine-rich BMP regulator 2 - Homo
sapiens (Human)
Length = 814
Score = 33.5 bits (73), Expect = 5.1
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -3
Query: 318 CQLPGL---RLEESVERIGLPTPRCLCLVGILAHQGLGMPCFPRASKASPKQG 169
C PG R +E G+P RCLCL G ++ Q L PC P A A P+QG
Sbjct: 665 CPRPGAAHARHQEYFSPPGVPCRRCLCLDGSVSCQRL--PC-PPAPCAHPRQG 714
>UniRef50_Q4PDK8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 388
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -3
Query: 585 IKESPCKTRYTWSSELAGFLVPKPKSTDFPFPNGVVTHGAIVVGPA---SFPYPSN 427
I+ SP T G L P + P+PN VTH PA S+P+P+N
Sbjct: 325 IESSPLNAPSTLPGSERGSLYQTPMTEARPYPNNDVTHSLYTSDPAYNTSYPHPTN 380
>UniRef50_Q8CJW4 Cluster: Putative uncharacterized protein SCO3500;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO3500 - Streptomyces
coelicolor
Length = 680
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 566 LQGDSLIFHSFGWEGTGLWGSLPYWMGSRLSVWT 667
LQG+ L HSF E TG W S YW WT
Sbjct: 130 LQGERL--HSFAEETTGRWWSSAYWQNHNWICWT 161
>UniRef50_A6PQJ2 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 851
Score = 33.1 bits (72), Expect = 6.7
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 10/122 (8%)
Frame = +3
Query: 162 GKCPAWGKLYLPLGSTASQALDG--PRCP---QDKDIGGWEDRF-FQHFLQAEDREAGKA 323
GKC W Y L +QA+ P+ +++ +R F F + + E
Sbjct: 298 GKCRPWALTYYQLAVETAQAIHKYHPKAKVFFSNQEFRTEANRLLFDRFYRDKSPEFAGY 357
Query: 324 PYPVLSSSDLEPTVVDEGPAL----GTYKTSCFIQEQTYYLGKGKMPGQQLLPRGSLHHW 491
Y SS + V PA G Y S F++ + YL PGQQ+L + HW
Sbjct: 358 AYGPGSSENSFYGYVKPNPAFDRYPGVYPGSAFLKSRLNYLA----PGQQVLAFMDIGHW 413
Query: 492 ER 497
+R
Sbjct: 414 KR 415
>UniRef50_A7S489 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 235
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 108 ILLGTTVWAQSPGSSQNP--GKCPAWGKLYLPLGSTASQALDGPRCPQDKDIGGWE 269
+LL + WAQS S P K A G P T DGP C Q +G W+
Sbjct: 20 VLLCCSGWAQSGNSCPTPICSKGCAQGVCVKPDNCTCHPGYDGPSCDQACTLGRWD 75
>UniRef50_A5KCP6 Cluster: Tryptophan/threonine-rich antigen; n=1;
Plasmodium vivax|Rep: Tryptophan/threonine-rich antigen
- Plasmodium vivax
Length = 313
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 13 TERTGLLNLNSTILKPLEKKLQKSKNGRWKWPFFLVPRFGPKAREVPR 156
+ +T N +T+ KP + KSK+ K P P+ PK +EVP+
Sbjct: 72 SNKTETKNAKNTLSKPPMQVTDKSKDEAKKTPLQSTPKLTPKTKEVPK 119
>UniRef50_Q2GSS9 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 924
Score = 33.1 bits (72), Expect = 6.7
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 95 GGSGHSS-WYHGLG-PKPGKFPESG*MPCLGEALLALGKHGIPSP*WAKMPTRQRHRGVG 268
GGS S+ YHG+ P PG P +P +++A G G P P + + QR GV
Sbjct: 495 GGSRMSADHYHGIATPAPGANPSRSMVPGNNNSVVAAGMRGTPPPSYDQQTQIQR-LGVP 553
Query: 269 RPILSTLSSSRRPGSWQSTVPRAVFVRS 352
P +++ + +Q R++F S
Sbjct: 554 PPAVTSRAMKESSQKFQQQT-RSLFTAS 580
>UniRef50_Q1DX43 Cluster: Protein transport protein SEC31; n=6;
Pezizomycotina|Rep: Protein transport protein SEC31 -
Coccidioides immitis
Length = 1261
Score = 33.1 bits (72), Expect = 6.7
Identities = 28/109 (25%), Positives = 45/109 (41%)
Frame = -2
Query: 394 YVPSAGPSSTTVGSRSDEDSTGYGALPASRSSA*RKC*KNRSSHPPMSLSCGHLGPSRAW 215
Y P+ S T+ G + +TGY +S+ + PP S G P RA
Sbjct: 856 YAPTTTTSYTSAGGTTYTPTTGYQPPQPRQSNVIPP--PQPLAPPPQSGPAGLAPPPRA- 912
Query: 214 DAVLPKGK*SFPQAGHLPGFWELPGLWAQTVVPRRMATSTGHFLIFEVF 68
+ P + +A ++P + +LP + + PRR TG +I F
Sbjct: 913 SSQSPSVAAPYTRATNIPAWNDLPEGFGRAATPRRSTPVTGSSVISSPF 961
>UniRef50_Q67GM1 Cluster: AdeD; n=1; Acinetobacter sp. 4365|Rep:
AdeD - Acinetobacter sp. 4365
Length = 374
Score = 32.7 bits (71), Expect = 8.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 432 LGKGKMPGQQLLPRGSLHHWERENP*IWVLGQE 530
LG G P L+P+G+L NP +W++G++
Sbjct: 292 LGTGTRPNSVLIPQGALFRDAEGNPLVWIVGKD 324
>UniRef50_Q01YP9 Cluster: Type I phosphodiesterase/nucleotide
pyrophosphatase precursor; n=1; Solibacter usitatus
Ellin6076|Rep: Type I phosphodiesterase/nucleotide
pyrophosphatase precursor - Solibacter usitatus (strain
Ellin6076)
Length = 497
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 228 GPRCPQDKDIGGWEDRFFQHFLQAEDREAGKAPYPVLSSSD 350
GP P++K+ DR H LQA DR+ G A V+ +SD
Sbjct: 271 GPDSPEEKEALMETDRDLDHLLQAVDRQVGLANTLVVLTSD 311
>UniRef50_A3ERR2 Cluster: Uncharacterized conserved protein; n=1;
Leptospirillum sp. Group II UBA|Rep: Uncharacterized
conserved protein - Leptospirillum sp. Group II UBA
Length = 216
Score = 32.7 bits (71), Expect = 8.9
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2
Query: 485 PLGKGKSVDLGFGTRNPASSLDQV--YRVLQGDSLIFHSFGW------EGTGLWGSLPYW 640
PL + ++ GFGTRNP+S+ +R + G S++ G E G W S P
Sbjct: 6 PLFSSRGIEHGFGTRNPSSAGQDACFFRQVHGTSVLETFPGGATKDRPEADGGWTSCP-- 63
Query: 641 MGSRLSVWT 667
G+ ++VWT
Sbjct: 64 -GTAVAVWT 71
>UniRef50_A7PJU8 Cluster: Chromosome chr12 scaffold_18, whole genome
shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
chr12 scaffold_18, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 377
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 449 AGPTTIAPWVTTPLGKGKS-VDLGFGTRNP---ASSLDQVYRVLQGDSLIFHSFGW 604
AG T+A +T PL K+ V +G G+ A LD+V R+L G S +++ FGW
Sbjct: 18 AGSVTLASLLTYPLDTLKTLVQVGSGSGKQLGTAQILDRV-RILSGTSGLYNGFGW 72
>UniRef50_P50745 Cluster: SH2B adapter protein 3; n=3; Rattus
norvegicus|Rep: SH2B adapter protein 3 - Rattus
norvegicus (Rat)
Length = 368
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -2
Query: 268 SHPPMSLSCGHLG-------PSRAWDAVLPKGK*SFPQAGHLPGFWELPGLWAQTVVPRR 110
SH P+ L G G RAW + +PKGK P ++P W L G+ V P R
Sbjct: 30 SHQPLPLQVGAPGHRVTSFLSGRAWPSYIPKGKHGLPGPRYVPDPWSL-GVLGH-VAPLR 87
Query: 109 MATS 98
+ T+
Sbjct: 88 VTTT 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 905,463,807
Number of Sequences: 1657284
Number of extensions: 23917080
Number of successful extensions: 75227
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 69062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75159
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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