Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0222
(684 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 150 1e-36
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 148 4e-36
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 147 6e-36
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 146 1e-35
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 120 1e-27
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 79 4e-15
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 79 4e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 6e-15
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 78 8e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 76 3e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 73 3e-13
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 2e-12
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 70 2e-12
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 62 4e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 40 0.002
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 40 0.002
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 39 0.004
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.7
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_33571| Best HMM Match : Vicilin_N (HMM E-Value=3.9) 28 6.1
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 6.1
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 8.1
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 8.1
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 150 bits (363), Expect = 1e-36
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = +2
Query: 44 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 223
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 224 KYVPRAILVDWSP 262
KYVPRA+LVD P
Sbjct: 271 KYVPRAVLVDLEP 283
Score = 148 bits (359), Expect = 4e-36
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESC
Sbjct: 281 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 340
Query: 433 DCLQGFQ 453
DCLQGFQ
Sbjct: 341 DCLQGFQ 347
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDK 644
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD+
Sbjct: 367 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 411
Score = 35.5 bits (78), Expect = 0.040
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 641 QTYCIDNEALYDIC 682
+TYCIDNEALYDIC
Sbjct: 411 ETYCIDNEALYDIC 424
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 148 bits (359), Expect = 4e-36
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 127
Query: 433 DCLQGFQ 453
DCLQGFQ
Sbjct: 128 DCLQGFQ 134
Score = 145 bits (352), Expect = 3e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDK 644
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD+
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 198
Score = 35.5 bits (78), Expect = 0.040
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 641 QTYCIDNEALYDIC 682
+TYCIDNEALYDIC
Sbjct: 198 ETYCIDNEALYDIC 211
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 147 bits (357), Expect = 6e-36
Identities = 65/67 (97%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESC
Sbjct: 13 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 72
Query: 433 DCLQGFQ 453
DC+QGFQ
Sbjct: 73 DCIQGFQ 79
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 507 LKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDK 644
LKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD+
Sbjct: 98 LKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 143
Score = 35.5 bits (78), Expect = 0.040
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 641 QTYCIDNEALYDIC 682
+TYCIDNEALYDIC
Sbjct: 143 ETYCIDNEALYDIC 156
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 221 GKYVPRAILVDWSP 262
GKYVPRA+LVD P
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 146 bits (354), Expect = 1e-35
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+ESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESC 127
Query: 433 DCLQGFQ 453
DC+QGFQ
Sbjct: 128 DCIQGFQ 134
Score = 142 bits (343), Expect = 3e-34
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PR++L+D P
Sbjct: 61 PRSVLIDLEP 70
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/45 (93%), Positives = 45/45 (100%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDK 644
KIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENTD+
Sbjct: 154 KIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDE 198
Score = 35.5 bits (78), Expect = 0.040
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +2
Query: 641 QTYCIDNEALYDIC 682
+TYCIDNEALYDIC
Sbjct: 198 ETYCIDNEALYDIC 211
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 145 bits (352), Expect = 3e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVF 327
LEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 120 bits (289), Expect = 1e-27
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+E+C
Sbjct: 24 LEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENC 83
Query: 433 DCLQGFQ 453
DC+QG Q
Sbjct: 84 DCMQGVQ 90
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKV 575
KIREEYPDRI++ +SVVPSPKV
Sbjct: 110 KIREEYPDRILSAFSVVPSPKV 131
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 215 SGGKYVPRAILVDWSP 262
+GG+YVPR+ILVD P
Sbjct: 11 TGGRYVPRSILVDLEP 26
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++ C
Sbjct: 503 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 562
Query: 433 DCLQGF 450
LQGF
Sbjct: 563 TGLQGF 568
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 221 GKYVPRAILVDWSP 262
GK+VPRA+ VD P
Sbjct: 492 GKHVPRAVFVDLEP 505
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 199
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 589 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 632
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C
Sbjct: 655 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 714
Query: 433 DCLQGF 450
LQGF
Sbjct: 715 TGLQGF 720
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++ C
Sbjct: 134 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 193
Query: 433 DCLQGF 450
LQGF
Sbjct: 194 TGLQGF 199
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 44 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 217
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 218 GGKYVPRAILVDWSP 262
GK+VPRA+ VD P
Sbjct: 122 AGKHVPRAVFVDLEP 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 574 VPRAVFVDLEP 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 741 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 784
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 220 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 263
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 78.2 bits (184), Expect = 6e-15
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ D P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSD 199
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++ C
Sbjct: 69 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 128
Query: 433 DCLQGF 450
LQGF
Sbjct: 129 TGLQGF 134
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 61 VPRAVFVDLEP 71
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D
Sbjct: 155 RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 198
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++ C
Sbjct: 874 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQC 933
Query: 433 DCLQGF 450
LQGF
Sbjct: 934 TGLQGF 939
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK ++ C
Sbjct: 441 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGC 500
Query: 433 DCLQGF 450
LQGF
Sbjct: 501 TGLQGF 506
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 221 GKYVPRAILVDWSP 262
GK+VPRA+ D P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 433 VPRAVFVDLEP 443
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 960 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 1003
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P +S VVEPYN+ L+ H +E++D
Sbjct: 527 RLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSD 570
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 76.6 bits (180), Expect = 2e-14
Identities = 30/66 (45%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++ C
Sbjct: 488 LEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQC 547
Query: 433 DCLQGF 450
LQGF
Sbjct: 548 SGLQGF 553
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++ C
Sbjct: 55 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQC 114
Query: 433 DCLQGF 450
LQGF
Sbjct: 115 TGLQGF 120
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 221 GKYVPRAILVDWSPA 265
GK+VPRA+ VD P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 98 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDWSP 262
+G WE+ EHGI P G D + + N +++E GK+VPRA+ D P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 574 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSD 617
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 141 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 184
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQC 129
Query: 433 DCLQGF 450
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 156 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 199
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C
Sbjct: 35 LEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQC 94
Query: 433 DCLQGF 450
LQGF
Sbjct: 95 TGLQGF 100
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + ++V P+P++S VVEPYN+ LS H +E++D
Sbjct: 121 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSD 164
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 185 ERINVYYNEASGGKYVPRAILVDWSP 262
+ N ++ E GK+VPRA+ VD P
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +1
Query: 271 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 450
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 93 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 136
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +3
Query: 513 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDKPTALTTRLYTTS 680
++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E TD+ + + Y +
Sbjct: 36 LQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDEVSEIVVEPYNAA 91
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 641 QTYCIDNEALYDIC 682
+ +CIDNEALYDIC
Sbjct: 103 EVFCIDNEALYDIC 116
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 409 VRKESESCDCLQGFQ 453
+RKE+E CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 72.5 bits (170), Expect = 3e-13
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 432
LEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK ++ C
Sbjct: 981 LEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQC 1040
Query: 433 DCLQGF 450
LQGF
Sbjct: 1041 SGLQGF 1046
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 504 HLKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
HL + +Y + ++V P+P +S VVEPYN+ L+ H +E++D
Sbjct: 1067 HLSV--DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSD 1110
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 206 NEASGGKYVPRAILVDWSP 262
+EA+ GKYVPRA+LVD P
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 450
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 81 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 124
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
KIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVAD 105
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +1
Query: 331 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 453
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 650 CIDNEALYDIC 682
CIDNEALY+IC
Sbjct: 109 CIDNEALYNIC 119
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 227 YVPRAILVDWSPA 265
+VPRA+ VD P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 450
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + ++V P+P++S VVEPYN+ L+ H +E++D
Sbjct: 81 RLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSD 124
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSPAPWTLSAPDL 292
+VPRA+ VD P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 310 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 450
P+ + G+ A NN+A+GHYT G + VD VLD +RK ++ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D
Sbjct: 146 RLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSD 189
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 417
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 417
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 310 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 450
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDE 133
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 41 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 208
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 209 EASGGKY 229
E + GK+
Sbjct: 250 ETASGKH 256
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y R ++V P+P++S VVEPYN+ L+ H +E++D
Sbjct: 287 RLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSD 330
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 110 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 211
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 513 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
+ ++YPD T +V PS D + PYN+ L++HQL E+ D
Sbjct: 169 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHAD 210
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 354
+E G ++++ GP +F + SG GNNW
Sbjct: 82 MEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 513 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
+ ++YPD T +V PS D + PYN+ L++HQL E+ D
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHAD 62
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 641
++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D
Sbjct: 31 RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSD 74
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +1
Query: 307 RPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKESESCDCLQG 447
R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 564 SPKVSDTVVEPYNATLSVHQLVENTD 641
S +SD VV+PYN+ L++ +L +N D
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNAD 236
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 470 VAAPGPVWAPSSSKDP*RVPRQNHEHILSSPLAQSIRHCRRTIQC-DSLSSP 622
V++ GPV+AP S+ RVP +N E+ S+ + R C D+ S P
Sbjct: 413 VSSTGPVFAPKSAGSSSRVPTENDENSASASDETTEESTSRNEVCTDTPSGP 464
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 509 KDP*RVPRQNHEHILSSPLAQSIR 580
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_33571| Best HMM Match : Vicilin_N (HMM E-Value=3.9)
Length = 190
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 290 GPERTESMVPGSSRREWRGARTCR 219
G +RT + G +R+EWRG +CR
Sbjct: 158 GEDRTLAEHQGPTRQEWRGPYSCR 181
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 147 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPF 245
P +P++ + T + S S +T PPA+ + P PF
Sbjct: 793 PAIPSLMSSTLTSSISTTSTGMPPASLSTPTPF 825
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 208 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 98
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 510 KIREEYPDRIMNTYSVVPSPKVS 578
K++E+YPD I++++ + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 521 RVPRQNHEHILSSPLAQSIR 580
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 521 RVPRQNHEHILSSPLAQSIR 580
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 521 RVPRQNHEHILSSPLAQSIR 580
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Frame = +3
Query: 147 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTGARHHGLCPLRT-----FRTDL 305
P P ++S +M+T K TCPA +S G LCP +RTDL
Sbjct: 131 PAAPPAACSGATYSEAMWTECK-----TCPAGYSCPGNARKELCPFSDSTGYYYRTDL 183
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 188 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 39
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,950,359
Number of Sequences: 59808
Number of extensions: 530509
Number of successful extensions: 1611
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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