Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0221
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    26   0.26 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.45 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.8  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 158 KKIEDLKKEIDSKGKDIE*LKNQVGNVY 75
           +K+ DL +E+D   +D+E LK     +Y
Sbjct: 289 QKLRDLNREVDQIKQDVEDLKRWSDRIY 316


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 459 LAFAGISLPDNPAFFITHTSPLFHIPNLQP 548
           +A + +SLP NPAFF     PL    N  P
Sbjct: 43  MAASRLSLPTNPAFFHPGLLPLAWQANSPP 72


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 432  VPNCRRTTQNSQTKRIDSKLK 370
            VPN R    + Q K +DS LK
Sbjct: 1257 VPNLRNQNLSHQAKNLDSNLK 1277


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 486 DNPAFFITHTSPLFHI 533
           DNP +++ H   LFHI
Sbjct: 662 DNPGYWLFHCHFLFHI 677


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 315 ANTSLSPSNLALTSFSFAISVWNLFFSFGNSESF 416
           A++S +PS+ + +SFS A S  N  +   N E++
Sbjct: 199 ASSSPTPSHSSESSFSAASSYTNTIYHQENFENY 232


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 486 DNPAFFITHTSPLFHI 533
           +NP F++ H   LFHI
Sbjct: 662 NNPGFWLFHCHFLFHI 677


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 435 ISSISFSNLAFAGISLPDNPAFFITHTS 518
           +S++ +S L       PD+  F+  HTS
Sbjct: 10  LSALIYSVLGQENFKCPDDFGFYPHHTS 37


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 435 ISSISFSNLAFAGISLPDNPAFFITHTS 518
           +S++ +S L       PD+  F+  HTS
Sbjct: 10  LSALIYSVLGQENFKCPDDFGFYPHHTS 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,421
Number of Sequences: 336
Number of extensions: 1699
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)