Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0221
(569 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 36 0.023
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 36 0.031
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.12
SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14) 33 0.12
SB_1639| Best HMM Match : VWA (HMM E-Value=0) 33 0.12
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_47393| Best HMM Match : Remorin_C (HMM E-Value=1.4) 33 0.22
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 33 0.22
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 32 0.29
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 31 0.50
SB_47804| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 31 0.66
SB_34410| Best HMM Match : Remorin_C (HMM E-Value=1.5) 31 0.66
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094) 30 1.5
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_42361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058) 29 2.7
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 29 2.7
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 29 2.7
SB_18589| Best HMM Match : Filament (HMM E-Value=0.024) 29 2.7
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 3.5
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 29 3.5
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 3.5
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_7818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_35163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43023| Best HMM Match : Spindle_assoc (HMM E-Value=1.4) 28 6.2
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 28 6.2
SB_26402| Best HMM Match : K-box (HMM E-Value=1) 28 6.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 28 6.2
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 6.2
SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 28 6.2
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 27 8.2
SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 27 8.2
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_6850| Best HMM Match : TPR_2 (HMM E-Value=1.7e-08) 27 8.2
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 36.7 bits (81), Expect = 0.013
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = -2
Query: 505 MKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+KNA G+ M EK+ RSK+ + E + + I +L+ +KLE +
Sbjct: 2852 LKNARKEGENMKKHVMAEKDA---RSKVEQELHESNEQMKTQKRNIQELQRNVSKLEEEN 2908
Query: 325 DVFANKYKALENETSNLSNQ 266
V K K L+ +SNL NQ
Sbjct: 2909 AVLEEKVKLLDEASSNLKNQ 2928
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = -1
Query: 233 EAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIR 54
+A I KL +L+ S + +SD +K+ DL + K+ E LK ++GN + ++
Sbjct: 3536 QADIGKLKTELQ---STKKDLSDKIKEYNDLFAKNKVTEKENEFLKKELGNTHNREAELK 3592
Query: 53 I 51
+
Sbjct: 3593 L 3593
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 35.9 bits (79), Expect = 0.023
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = -1
Query: 248 EMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKN 69
E+K +E +IN L D T ++ A+ ++ +ED K E++ + E LK Q+ + KN
Sbjct: 109 ELKAKEDEINTLKQDTVRLTKMREAIQRRLRAVEDQKLEVEQQK---ETLKGQIAGLRKN 165
Query: 68 RPRIRISCSKRL 33
+ + K+L
Sbjct: 166 LLKAAGATQKQL 177
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
EK ID++ +L +++ +KN + +AK+K+V + GD + + LE E
Sbjct: 151 EKSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGDANKVNARVAELEKE 206
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K ID++ +L +++ +KN + +AK+K+V + GD + + LE E
Sbjct: 596 KSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGDANKVNARVAELEKE 650
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K ID++ +L +++ +KN + +AK+K+V + GD + + LE E
Sbjct: 1795 KSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGDANKVNARVAELEKE 1849
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYK---ALE 293
++L+ EID++R+KLS S + R +TE ++D +LE D+F + + AL+
Sbjct: 2327 SRLKIEIDDLRNKLSSAKSRY----ERVETETTIVRDAGGQLESGVDMFPDMQEDVDALK 2382
Query: 292 NETSNLSN 269
E + L++
Sbjct: 2383 AEKNRLND 2390
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 221 NKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGN 81
NKLS + A + Q + I+ LKKEID +I+ L++ + N
Sbjct: 694 NKLSEAERQAAATQRESVEKDTTIDSLKKEIDDLNNEIDELRSDLMN 740
>SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14)
Length = 558
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K ID++ +L +++ +KN + +AK+K+V + GD + + LE E
Sbjct: 212 KSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGDANKVNARVAELEKE 266
>SB_1639| Best HMM Match : VWA (HMM E-Value=0)
Length = 812
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -2
Query: 469 AKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALEN 290
A + E+ ++E +++L+K D N NRF+ + LK VNAKL K + Y AL++
Sbjct: 368 AVGEAERVLEEWKARLAKGDV---NGVNRFKDAVNTLKSVNAKLFVIKFGAKSNYTALQS 424
Query: 289 ETSNLSN 269
S+
Sbjct: 425 GVERKSD 431
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -2
Query: 478 EMPAKAKLEKEIDEIRSKLSKNDSEFPNE---KNRFQTEIAKLKDVNAKLEGDKDVFANK 308
E+ +A EK++ E KL KN+ NE KN ++A L+ +LE +
Sbjct: 50 EIEQRATKEKDLKEKMRKLEKNNERLANEVKSKNDLLVKVALLETERKRLEEELKTKEKS 109
Query: 307 YKALENETSNLSNQ 266
Y +E++ ++ ++
Sbjct: 110 YSKIEDKCRSMKDK 123
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = -2
Query: 484 GKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKY 305
GK+ +LE+ + +KL + ++E +++ +TE K+ KLEG+ + A K
Sbjct: 3 GKQSVDAKELEETLQSFLTKLKEVEAERAELEDQLKTEEEKID----KLEGEIEQRATKE 58
Query: 304 KALENETSNL 275
K L+ + L
Sbjct: 59 KDLKEKMRKL 68
>SB_47393| Best HMM Match : Remorin_C (HMM E-Value=1.4)
Length = 396
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A E A + ++ L ++ Q S+ K+E ++EI+ KGK +E K++
Sbjct: 270 AAENRDKHLADVKSKASRLAGSSQQQVVESEACAKVELRQREIERKGKMVEMNKDKAAKE 329
Query: 77 YKNRPRIRISCSKRLADKSKNKK 9
+ + R+R + + D++ K
Sbjct: 330 AREKLRLRREREQFVKDRANALK 352
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 481 KEMPAKAKLEKE-IDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKY 305
K++ +A K+ ++E + + SE EK + Q ++ KLK+ E ++ F +
Sbjct: 945 KKLQMEAVAAKQALEETKLNQIRIMSELEKEKKKMQEDVEKLKEAKKHREKMREEFRASF 1004
Query: 304 KALENETSNLSN 269
AL + SN+ +
Sbjct: 1005 SALGRKASNMDD 1016
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 254 TEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVY 75
T E++ A + ++ D+ N LQ ++ K +E +KE K K IE LKN+ +
Sbjct: 47 TAELEAERANMLRMKTDMSN---LQARLNQAEKALEQSRKEGAKKDKTIEDLKNKNSELE 103
Query: 74 KN 69
+N
Sbjct: 104 QN 105
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDV---NAKLEGDKDVFANKY---KALENE 287
EID +R +L +E + +N F+ + +LKDV +++L D A+++ + LE E
Sbjct: 1284 EIDALRQELVDKTNEVEHLRNDFENQTLELKDVQQRSSELSSRLDSLADRHSECRNLEFE 1343
Query: 286 TSNLSNQ 266
NL +Q
Sbjct: 1344 VKNLKDQ 1350
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNL 275
EI+ ++++L K +++ E++RF KL++ + + K LEN ++
Sbjct: 779 EIETLKTRLQKAEADLAKERSRFYELELKLEERLTSHRASELTYEEKINELENAKKDI 836
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNE-KNRFQTEIA-KLKDVNAKLEGDKDVFANKYKALEN 290
AKLE E E++ +L+KN+ E K F +A K+ + KL+ D A + +A
Sbjct: 926 AKLETEKMELQERLTKNNEEMQERMKTEFAEHLASKVASLELKLQ---DTVAEEVQAYRE 982
Query: 289 ETSNLSNQ 266
E + NQ
Sbjct: 983 EIKDFENQ 990
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKY- 305
++M +AK + E + +L K +EF EK +T+++ L+ + L DK+ +
Sbjct: 401 EDMTEQAKAA--LKENKERLEKQTAEFSEEKELLKTQVSNLEGILKNLRDDKERSEQHFV 458
Query: 304 KALENETSNLSNQC 263
L++ S N C
Sbjct: 459 SELDSLRSRFDNLC 472
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K ID++ +L +++ +KN + +AK+K+V + G+ + + LE E
Sbjct: 60 KSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERKGGNANKVNARVAELEKE 114
>SB_47804| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 402
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A E A + ++ L ++ Q S+ K E ++EI+ KGK +E K++
Sbjct: 276 AAENRDKHLADVKSKASRLAGSSQQQVVESEACAKAELRQREIERKGKMVEMNKDKAAKE 335
Query: 77 YKNRPRIRISCSKRLADKSKNKK 9
+ + R+R + + D++ K
Sbjct: 336 AREKLRLRREREQFVKDRANALK 358
>SB_34410| Best HMM Match : Remorin_C (HMM E-Value=1.5)
Length = 303
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A+E A + ++ L ++ Q S+ K+E +++ID K K +E K++
Sbjct: 177 ASENRDKHLADVKSKASRLAGSSQQQVVESEACAKVELRQRKIDRKRKMVEMNKDKAAKE 236
Query: 77 YKNRPRIRISCSKRLADKSKNKK 9
+ + R+R + + D++ K
Sbjct: 237 AREKLRLRCEREQLVKDRANALK 259
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 478 EMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLE 335
E K KLE++ E+R KL KN E K + E+ + K + K++
Sbjct: 309 EKQKKIKLEQQEKELRDKLLKNLKEMKERKQELERELLR-KQIKNKVK 355
>SB_24090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = -2
Query: 457 LEKEIDEIRSKLSKNDSEFPN-----EKNRFQTEIAKLKDVNAKLEGDKDVFANKYK--A 299
L +EI ++S+LSK +E + EKN E +KL + AKLE D + +YK
Sbjct: 164 LRREIKALKSELSKAKTERDSFKAKCEKNERLLE-SKLNECKAKLEEYSDKYHIEYKQPQ 222
Query: 298 LENETSNLSNQ 266
++ T + NQ
Sbjct: 223 IQENTDSAGNQ 233
>SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094)
Length = 332
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK-----DVFANKYK--ALE 293
++I++++ ++ + + E N + E+ KLK+ LE +K ++ + KYK ALE
Sbjct: 46 EDIEKLKQEIEQKEREINNLRKTRNDEVKKLKERIHVLEEEKKRLEEELASVKYKLTALE 105
Query: 292 NETSNLSN 269
+E LSN
Sbjct: 106 SEVKALSN 113
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = -1
Query: 200 KNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSKRLADKS 21
K +T + + K++++ KKEI KD+ +K +V + + ++ S R +
Sbjct: 1340 KEVQETKTKVDETNKEVQETKKEIQETKKDVHEVKGKVSEMAVDLASLKEEFSSRNVNSK 1399
Query: 20 KN 15
K+
Sbjct: 1400 KD 1401
>SB_42361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYK 72
+E+K Q+ +++ L+ + D KKIE+L+KE K+ L+ + +
Sbjct: 134 KELKTNTEQVEQIATLTLEVVELKKKLEDAKKKIEELQKE-----KEAILLRTK---ATR 185
Query: 71 NRPRIRISCSKRLADKSKNKKKR 3
R R+ S LAD +K ++R
Sbjct: 186 TRDRVTPSRQDLLADMAKITRER 208
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/74 (21%), Positives = 33/74 (44%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANK 308
+GK +LE+ +D S++ + + +NR TE A D + E +++
Sbjct: 1913 AGKYHRENVELERNLDAANSRIKVLEKQLARVENRLSTEKASKDDAKEQNEENRERTRKT 1972
Query: 307 YKALENETSNLSNQ 266
L+ + LS++
Sbjct: 1973 IGELQAKVKKLSDE 1986
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 236 REAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGN 81
R + + +L + + + D + +DL K +DSK KDIE LK+ N
Sbjct: 1482 RNSTLTRLLQESLGGNCKTSLIVDYKRLSDDLSKLLDSKDKDIEDLKSSYEN 1533
>SB_30512| Best HMM Match : GLTT (HMM E-Value=0.00058)
Length = 1083
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDS---EFPNEKNRFQTEIAKLKDVNAKLEGDKDVF 317
+G+E+ L+KE+ +++ +L +++ + N+ TE+A ++ ++L+ +
Sbjct: 527 NGQEIERMEDLKKELSKVKEQLKASETTIEDLQNQLATINTELAAVRS-QSQLDIQQTHQ 585
Query: 316 ANKYKALENETSNLSN 269
+ K LE E LSN
Sbjct: 586 ILRIKELEEELKRLSN 601
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKL 359
K KLE+++ E+R SK +SE+ +K + E A+L
Sbjct: 283 KGKLEEQLGELRILKSKMESEYKIDKATKEQEFAEL 318
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -2
Query: 499 NAGLSG---KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
NAG K + K K + ++RSKL K + + +QT + L D E +
Sbjct: 144 NAGFDSFMVKALFFKPKKCSNLGQLRSKLGKCKTAVEQADSAYQTSVRVLDDTRVVWERE 203
Query: 328 KDVFANKYKALENE 287
N ++ LE E
Sbjct: 204 MATCCNVFQNLEEE 217
>SB_18589| Best HMM Match : Filament (HMM E-Value=0.024)
Length = 324
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
KLE+E+ + S ++ + + NEK+ + ++ K E F + L E+S
Sbjct: 197 KLEQELQQKASAITNLEQKSHNEKSSLEKQLYNAKAALEGKEAQLSTFQKDLETLREESS 256
Query: 280 N 278
N
Sbjct: 257 N 257
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 457 LEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK----DVFANKYKALEN 290
L+KEI E+R + S+ +R++ +IA+LK+ N +++ DK ++ +KY EN
Sbjct: 1869 LQKEIIELREENISQKSKLYEINDRYELQIAELKNDN-EIKQDKIEQLEISISKY---EN 1924
Query: 289 ETSNL 275
E +L
Sbjct: 1925 EMRDL 1929
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -2
Query: 457 LEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD----KDVFANKYKALEN 290
L KE+ I +LSK +S E+ + LK KL G+ D+ NK A +
Sbjct: 539 LRKELRRITEELSKQESARREEQADQERRCKALKSEADKLHGEVLRLNDILYNKELAEDE 598
Query: 289 ETSNLSNQ 266
E + L+ Q
Sbjct: 599 ERAQLAAQ 606
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSKR 36
K+ LK E+ S K+IE LKN + VY+ + + + S K+
Sbjct: 482 KENNKLKDEVGSLSKEIEYLKNLMLEVYQTKQKQKESLCKK 522
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K K E+E+ E R+ + + + NE EIA L+ + EG+ K +ALE E
Sbjct: 758 KEKFERELQEKRTTI-RETKDISNE------EIATLERKFEEREGEFKSLCEKLRALETE 810
Query: 286 TSNLSN 269
S L++
Sbjct: 811 LSELNS 816
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPN--EKNRFQTEIAKLKDVNAKLEGDKDVF---ANKYK 302
+A+L+KEID++R++L+ ND N + + +++ + KLE + V KYK
Sbjct: 317 EARLKKEIDDLRAQLADNDDLEKNLDDMRKLESKYELVIIEKEKLEREIIVLREVETKYK 376
Query: 301 ALENETSNLSNQ 266
L E L +
Sbjct: 377 LLVIEKEGLERK 388
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -1
Query: 164 CMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISC-SKRLADKSKNKK 9
C+ +I+D++KE+++ ++ L+ N+ + I+ SC R+ K++K
Sbjct: 1386 CLDRIDDVEKELENLKSILDSLEAHDENISQTIAEIKTSCRDSRIMSTDKSQK 1438
>SB_7818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 475 FPYQIILRFSSHIHLPYFTFQIFNHFFELKF 567
+PY++I+ S + L ++++ NH EL F
Sbjct: 71 YPYRVIVLLSHLVELSISSYRLSNHLVELSF 101
>SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 496 AGLSGKEMPAKAKLEKEIDEIRSKLSKNDS-EFPNEKNRFQTEIAKLKDVNAKLE 335
A LS K+ + +LE+E +E+R + +NDS + E T + ++ N LE
Sbjct: 852 AMLSDKDKELE-QLERETEELRKRTKENDSMQLKKETEVLMTALTAMQGKNTHLE 905
>SB_35163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD-VFANKYK 302
E+D++R+ L+K+ FPN + + ++A ++ + ++D VF +K K
Sbjct: 6 ELDQLRNVLAKDQEAFPNNPSLWLKDLASYIHLHLQNVPERDPVFEDKPK 55
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATS----LQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQ 90
+++K EA + L +L + + L D +KKI DLKK I I LK++
Sbjct: 231 QQLKEAEADVESLRRELVSVNAKNDLLNQEKKDLVKKINDLKKRITELELIINTLKDE 288
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 433 RSKLSKNDSEFPNEKNRFQTEIAKL-KDVNAKLEGDKDVFANKYKALENE 287
+SKL K ++ N+KN+ + KL D +E KD FA K K LE +
Sbjct: 594 QSKLLKEIADLKNDKNQLKQANQKLGHDRERAVEDAKDAFA-KIKDLEKQ 642
>SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/68 (19%), Positives = 31/68 (45%)
Frame = -1
Query: 218 KLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSK 39
K+ K + + + K++++ KKE+ KD+ +K +V + + ++ S
Sbjct: 233 KVDETKKEVQETKKDVQETKKEVQETKKEVQETKKDVHEVKGKVSEMAVDLASLKEEFSS 292
Query: 38 RLADKSKN 15
R + K+
Sbjct: 293 RKVNSKKD 300
>SB_43023| Best HMM Match : Spindle_assoc (HMM E-Value=1.4)
Length = 138
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -1
Query: 248 EMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEID 126
+++N E++I KLSAD + ++ S KI+ L+ E+D
Sbjct: 86 QIQNLESEIGKLSADRLSFDNMIKTNSTLQDKIQVLQDEMD 126
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYK 302
+ +ID++RSK + ++E N K R + + L+++ A E DK+ N YK
Sbjct: 232 QAQIDQMRSKNNMLETENANLKKRLEDKDQDLRNITA--ENDKNKVEN-YK 279
>SB_26402| Best HMM Match : K-box (HMM E-Value=1)
Length = 166
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 382 FQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNLSNQ 266
+Q EIA+L+ A++ D+DV +K K ET + Q
Sbjct: 42 YQCEIAQLRATIAQITSDRDVELDKLKRKLGETEYILQQ 80
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 493 GLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKL 338
G++ K A+ K ++ +R+ L K + I +LKD +AKL
Sbjct: 2353 GVNEKNRKAEEKYNASVNSMRNDLDKERQVLADRNENLTETIHRLKDESAKL 2404
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSK--NDSE-FPNEKNRFQTEIAKLK----DVNAKLEGDKDVFANKYK 302
K EK++ + ++LSK +SE NEK+ TE++ +K +V +L+ K+ +++
Sbjct: 4 KAEKDLVDAATQLSKAREESETHRNEKDALATELSNVKTIKENVETELQKVKEQLSDQAC 63
Query: 301 ALENETSNLS 272
LE+ S++S
Sbjct: 64 QLEDPVSSVS 73
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNAT-SLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGN 81
A ++ ++ + +N AD + SLQ +++ +++ D + EI + + IE + Q+G
Sbjct: 153 AAKKEASQNSLMNLEIADCQRTLESLQAKLAEREQQLTDAQDEIGHQERKIEDSRAQIGA 212
Query: 80 VYKNRPRIRISCSKRLADKSKNKK 9
V R + K A K KK
Sbjct: 213 VESQRQQTEERALKMKAMLVKTKK 236
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKA 299
AKLEK+ ++ R + K + + E K K+ A+ + D D +KYKA
Sbjct: 414 AKLEKQFNDARREHMKAVVSLRQAERQLAREKEKGKEQIAQKQKDFDTHMDKYKA 468
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYK 302
+ +ID++RSK + ++E N K R + + L+++ A E DK+ N YK
Sbjct: 2760 QAQIDQMRSKNNMLETENANLKKRLEDKDQDLRNITA--ENDKNKVEN-YK 2807
>SB_21662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKA 299
AKLEK+ ++ R + K + + E K K+ A+ + D D +KYKA
Sbjct: 16 AKLEKQFNDARREHMKAVVSLRQAERQLAREKEKGKEQIAQKQKDFDTHMDKYKA 70
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -2
Query: 469 AKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALEN 290
A+A L+ +I E+ K + E + K F+ ++++ E ++ K +ALEN
Sbjct: 2787 AQAPLQTKIKELERKTIQLLRERRDSKREFEGKLSES-------EKERSPLLEKIEALEN 2839
Query: 289 ETSNLSNQC 263
E +L QC
Sbjct: 2840 ENRDLVKQC 2848
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1
Query: 248 EMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKN 69
+ K Q+ K SA + +LQTA S KK +KKE++ K+ LK + V +
Sbjct: 951 DSKGESQQMTKNSA--ASMYALQTAQSHLEKKYFQVKKELEELWKERNELKRVLAAVQGD 1008
Query: 68 RP 63
P
Sbjct: 1009 LP 1010
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = -1
Query: 248 EMKNREAQINKLSADL--KNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*L--KNQVGN 81
E +N+ ++++ L + KNA SL+ ++++ LKK+ D+K + + L +++ N
Sbjct: 828 EKQNKISELDSLLKETVNKNAASLKACEERYNEQLDKLKKDADNKEEQLNALGKESEDKN 887
Query: 80 VYKNRPRIRISCSKRLADKSKNKKKR 3
R+ I K A S+ +R
Sbjct: 888 KLLEAARLEIEDLKSAAQVSETTLQR 913
>SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 814
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/77 (25%), Positives = 43/77 (55%)
Frame = -1
Query: 233 EAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIR 54
E ++ LS +K+A + DC+ + + +K + + D + L+N + Y+N+ I+
Sbjct: 556 EGFVHSLSP-VKHAEKNRKPYFDCLVQTGEAEK-VRAVCYDPQ-LRNNLLEPYQNKSPIK 612
Query: 53 ISCSKRLADKSKNKKKR 3
I+ +KR+A S +++ R
Sbjct: 613 ITATKRMASTSTSEEFR 629
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 248 EMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKD 111
++K A++ + S+ ++A S TAM D +K +ED K + +D
Sbjct: 1707 KVKPLHAKVAETSSAEESAVSKMTAMDDKLKGLEDRLKSLSQAYED 1752
>SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 457 LEKEIDEIRSKLSKNDSEFPNEKNRFQT---EIAKLKDVNAKLEGDKD 323
LE+E DE+ +L + E+ N +T E+ K K ++ K G KD
Sbjct: 551 LEREKDELGKELQRQKVEYDERLNTLETALSELLKAKGIDLKGLGLKD 598
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLE 335
K KE+ E++ LS ++E + + + + + +++ +NAKL+
Sbjct: 91 KAAKELTELKGSLSTREAEVESLQGQLKGKTSEINIMNAKLQ 132
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD 323
K L + E SKLSK +E NEK + ++KD+ +L ++
Sbjct: 1034 KKNLRTTVIEATSKLSKMYTELENEKRENEAFRVEVKDLMKRLTESRE 1081
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGN 81
+E+++ + NKL DL+ + A DC K++ + I + +++ L+ QV +
Sbjct: 165 QELRDEREKSNKLVVDLQKT---RKAQDDCEKEVNRCEATIKTLDSNLKDLRQQVAD 218
>SB_6850| Best HMM Match : TPR_2 (HMM E-Value=1.7e-08)
Length = 523
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD 323
KE+ ++RSK + + + ++++ E+ KD K EG K+
Sbjct: 251 KELKKLRSKQRRAEKKAQLQESKKAIEVNASKDAEKKAEGSKE 293
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,717,025
Number of Sequences: 59808
Number of extensions: 189623
Number of successful extensions: 955
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -