Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0221
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 33 0.11
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 33 0.14
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 33 0.14
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 33 0.14
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 33 0.19
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 33 0.19
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 32 0.25
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 32 0.25
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 31 0.44
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 31 0.44
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 31 0.44
Z82069-5|CAB04906.2| 739|Caenorhabditis elegans Hypothetical pr... 31 0.58
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 31 0.77
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.0
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.0
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.0
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.0
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 30 1.0
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 30 1.0
AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved oli... 30 1.0
AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein. 30 1.0
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 30 1.3
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 30 1.3
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 29 1.8
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 29 1.8
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 2.4
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 29 2.4
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 29 2.4
U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.1
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 28 4.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 4.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.1
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 28 5.4
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 5.4
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 28 5.4
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 28 5.4
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 5.4
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 7.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 7.2
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 27 7.2
U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical pr... 27 9.5
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 9.5
U42846-2|AAA83601.1| 108|Caenorhabditis elegans Hypothetical pr... 27 9.5
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 27 9.5
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 27 9.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 9.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 9.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 9.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 9.5
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 27 9.5
AF067211-6|AAC16989.1| 308|Caenorhabditis elegans Serpentine re... 27 9.5
AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine re... 27 9.5
AF022971-1|AAG23975.1| 380|Caenorhabditis elegans Hypothetical ... 27 9.5
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -2
Query: 517 DVCVMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAK---LKDVN 347
DV M+ A L + + KLEK++DEI K+ K + K + + + K KD +
Sbjct: 30 DVAEMEGAELDRVKRASDHKLEKKLDEIMEKVEKIKDKIEENKEKREKKNKKKGNKKDED 89
Query: 346 AKLEGDKD 323
+ E DKD
Sbjct: 90 EEEEEDKD 97
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
++K A + K +E +E++ +L K ++E + + + ++ KLKD AKLE +
Sbjct: 101 LLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGK-DVKVRKLKDKLAKLESE 159
Query: 328 KDVF 317
+D+F
Sbjct: 160 QDIF 163
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
++K A + K +E +E++ +L K ++E + + + ++ KLKD AKLE +
Sbjct: 101 LLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGK-DVKVRKLKDKLAKLESE 159
Query: 328 KDVF 317
+D+F
Sbjct: 160 QDIF 163
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
++K A + K +E +E++ +L K ++E + + + ++ KLKD AKLE +
Sbjct: 101 LLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGK-DVKVRKLKDKLAKLESE 159
Query: 328 KDVF 317
+D+F
Sbjct: 160 QDIF 163
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDV 320
++ KE+ E+R K K +E EK+ +L+ VNAKL+ +D+
Sbjct: 740 RIVKELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDL 786
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKD---VNAKLEGDKDVFANKYKALE 293
K +KEI+E KL FP E+ + ++KL+ + K EG + K L+
Sbjct: 688 KTKKEINEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQANELQRIVKELK 746
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDV 320
++ KE+ E+R K K +E EK+ +L+ VNAKL+ +D+
Sbjct: 726 RIVKELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDL 772
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKD---VNAKLEGDKDVFANKYKALE 293
K +KEI+E KL FP E+ + ++KL+ + K EG + K L+
Sbjct: 674 KTKKEINEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQANELQRIVKELK 732
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDV 320
++ KE+ E+R K K +E EK+ +L+ VNAKL+ +D+
Sbjct: 726 RIVKELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDL 772
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKD---VNAKLEGDKDVFANKYKALE 293
K +KEI+E KL FP E+ + ++KL+ + K EG + K L+
Sbjct: 674 KTKKEINEFSKKLENMTLSFPTEQEELEKLVSKLEKEEIIIVKAEGQANELQRIVKELK 732
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNL 275
EKE E K + E NE N+ +T+ KLKD + L+ D + + + KA E + L
Sbjct: 92 EKEKKEWDEKERRMQMEAENEANQHKTQTEKLKDQISTLQTDFEKVSAQRKAQEQMNAEL 151
Query: 274 SNQ 266
++
Sbjct: 152 VDE 154
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNL 275
EKE E K + E NE N+ +T+ KLKD + L+ D + + + KA E + L
Sbjct: 937 EKEKKEWDEKERRMQMEAENEANQHKTQTEKLKDQISTLQTDFEKVSAQRKAQEQMNAEL 996
Query: 274 SNQ 266
++
Sbjct: 997 VDE 999
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKD 353
K KL+++ + + +L K E N+K +F+ EI KLK+
Sbjct: 475 KKKLQEQSERNKIELEKKKQERMNKKRKFEDEIRKLKN 512
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
E+ ID RS S D+EF N ++RF+ E+ ++++ +L +
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSE 44
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
E+ ID RS S D+EF N ++RF+ E+ ++++ +L +
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSE 58
>Z82069-5|CAB04906.2| 739|Caenorhabditis elegans Hypothetical
protein W04A8.6 protein.
Length = 739
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 481 KEMPAKAKLEKE-IDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKY 305
+E+ K +L+KE + ++SK+ K ++ EKN I L + N ++ D +KY
Sbjct: 328 EELKTKYRLKKEEVTILKSKIEKMKLKWREEKNMMTDTIDDLGNENYQIRKSHDRLRHKY 387
Query: 304 KALE 293
L+
Sbjct: 388 SELK 391
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYK 302
KE+ L++E E + + +KND +++ EIA LK+ K+EG ++ N Y
Sbjct: 60 KELTDCQTLKEEPKEQKKENNKNDENSKKTIEKYEQEIAGLKE---KIEGLEEKVKNNYS 116
Query: 301 ALENETSNLSNQC 263
+ QC
Sbjct: 117 DENSSLKEELKQC 129
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = -1
Query: 197 NATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSKRLADKSK 18
+ SLQ A+SD KK+ D+ + ++ K + L N+ G +++ + + +L +K
Sbjct: 169 SGNSLQKAISDLQKKLRDIDQNVEEL-KKAQTLFNENGELFQKKKNQITNFYSKLREKVN 227
Query: 17 NKKK 6
++K
Sbjct: 228 EREK 231
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 475 MPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+ A+ K+EKE+ E++S L++ + E E+ K K+ E ++
Sbjct: 1366 LDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKER 1415
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+E+ A+ +LE+EI EIR++L E EK Q +D+ +LE K
Sbjct: 1111 EELAARQQLEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEELESYK 1162
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 475 MPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+ A+ K+EKE+ E++S L++ + E E+ K K+ E ++
Sbjct: 1366 LDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKER 1415
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+E+ A+ +LE+EI EIR++L E EK Q +D+ +LE K
Sbjct: 1111 EELAARQQLEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEELESYK 1162
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = -2
Query: 478 EMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKA 299
E+ +++ ++++++ +L K + N+K + ++ LK+ KLE + + N+ K
Sbjct: 852 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 911
Query: 298 L 296
L
Sbjct: 912 L 912
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
KL E+DE + + + EF + + L N +L+ + + +KY+ LENE
Sbjct: 644 KLRDEMDEHTNSIQE---EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 698
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFP--NEKN-RFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSN 278
+I + ++L E N+ N R Q E + + KL+GD + LENE
Sbjct: 845 KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 904
Query: 277 LSNQ 266
L N+
Sbjct: 905 LRNE 908
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = -2
Query: 478 EMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKA 299
E+ +++ ++++++ +L K + N+K + ++ LK+ KLE + + N+ K
Sbjct: 925 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 984
Query: 298 L 296
L
Sbjct: 985 L 985
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
KL E+DE + + + EF + + L N +L+ + + +KY+ LENE
Sbjct: 717 KLRDEMDEHTNSIQE---EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 771
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFP--NEKN-RFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSN 278
+I + ++L E N+ N R Q E + + KL+GD + LENE
Sbjct: 918 KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 977
Query: 277 LSNQ 266
L N+
Sbjct: 978 LRNE 981
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = -2
Query: 478 EMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKA 299
E+ +++ ++++++ +L K + N+K + ++ LK+ KLE + + N+ K
Sbjct: 925 ELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEKLRNENKE 984
Query: 298 L 296
L
Sbjct: 985 L 985
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
KL E+DE + + + EF + + L N +L+ + + +KY+ LENE
Sbjct: 717 KLRDEMDEHTNSIQE---EFKTRIDELNRRVENLLRENNRLKSEVNPLKDKYRDLENE 771
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFP--NEKN-RFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSN 278
+I + ++L E N+ N R Q E + + KL+GD + LENE
Sbjct: 918 KITHLENELHSRSGEIEKLNDLNQRLQKEKQDILNQKLKLDGDVQALKETIRKLENELEK 977
Query: 277 LSNQ 266
L N+
Sbjct: 978 LRNE 981
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -2
Query: 475 MPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+ A+ K+EKE+ E++S L++ + E E+ K K+ E ++
Sbjct: 1366 LDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKER 1415
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+E+ A+ +LE+EI EIR++L E E+ Q +D+ +LE K
Sbjct: 1111 EELAARQQLEREIREIRAQLDDAIEETNKEQAARQKAEKARRDMAEELESYK 1162
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 502 KNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD 323
KN SGK+ + +E D I K+++ND E P E K+ ++ D D
Sbjct: 520 KNGKKSGKKRRTTSTSSEEEDRIVHKVNRNDGEMPEGAKSTDDEDEKITSIDEFRALDMD 579
Query: 322 VFA 314
+ A
Sbjct: 580 LDA 582
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 502 KNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD 323
KN SGK+ + +E D I K+++ND E P E K+ ++ D D
Sbjct: 792 KNGKKSGKKRRTTSTSSEEEDRIVHKVNRNDGEMPEGAKSTDDEDEKITSIDEFRALDMD 851
Query: 322 VFA 314
+ A
Sbjct: 852 LDA 854
>AC024852-4|AAT81182.1| 794|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 3, isoform a
protein.
Length = 794
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A +++K RE + A+L+ + TA+ MK+ DL+K+ID+ + L+ +V
Sbjct: 43 ALKDIKKREKDL----AELQFPPEI-TAIRSNMKRFRDLQKQIDNSKATMNELREAYESV 97
Query: 77 YKNRPRIRISCSKRLADKS 21
+ +C + LA+++
Sbjct: 98 SSRTCSLHDACDRALAEQT 116
>AB212858-1|BAE66673.1| 792|Caenorhabditis elegans COGC-3 protein.
Length = 792
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/79 (25%), Positives = 41/79 (51%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A +++K RE + A+L+ + TA+ MK+ DL+K+ID+ + L+ +V
Sbjct: 43 ALKDIKKREKDL----AELQFPPEI-TAIRSNMKRFRDLQKQIDNSKATMNELREAYESV 97
Query: 77 YKNRPRIRISCSKRLADKS 21
+ +C + LA+++
Sbjct: 98 SSRTCSLHDACDRALAEQT 116
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = -1
Query: 257 ATEEMKNREA--QINKLSADLKNATSL-QTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQV 87
AT + K R+A + NKL D+ L +T +C++K+E L+ E K E L N
Sbjct: 167 ATYKAKYRDAVHRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLE---KRILAEKLSNSA 223
Query: 86 GNVYKNRPRIRISCS--KRLADKSKNKKK 6
GN + + C KR+ ++ K K K
Sbjct: 224 GN-GDGKEELEKKCEDYKRMLEQCKIKIK 251
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENET 284
A L++E+++ K+ +E + + IA +D+ AKL +D FA K K L
Sbjct: 673 AFLKRELEQKDDKILVVVAENVILREEWDANIAIKQDLRAKLNDLEDKFAQKSKELAASN 732
Query: 283 SNLS 272
SN++
Sbjct: 733 SNIA 736
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 394 EKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNL 275
++N F+ EI KLK N + ++ ++ +AL NE S++
Sbjct: 237 KQNEFEVEITKLKSQNDYFDSERLQLTDRIRALLNELSDV 276
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRF 380
K KLE+ I+E +S ++K + E PN+ ++
Sbjct: 362 KRKLEQNIEENKSMIAKIEMELPNQSTKY 390
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRF 380
K KLE+ I+E +S ++K + E PN+ ++
Sbjct: 362 KRKLEQNIEENKSMIAKIEMELPNQSTKY 390
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K ++EK IDE ++ + +F + + +TE +LK + D + KY+ L+ +
Sbjct: 116 KEEVEKLIDEQEDEIILAEMQFEIFQIKAETEARRLKKLLIMRNEDFSILKTKYEDLQKQ 175
Query: 286 TSNLS 272
+LS
Sbjct: 176 FYDLS 180
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 194 ATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRI 57
A L DC K+ L+ +I K +I LK+ V N P++
Sbjct: 428 ADELSWKTKDCQVKVSALENQIFDKNDEIVKLKSHVSTESGNSPKL 473
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LK-----NQV-GNVYKNRP 63
+N +LK+ T D ++ E LKK+ + KD+E +K N + GNV + R
Sbjct: 60 LNMSLDELKDKFKAVTRKRDTIRFTEHLKKKQEKLYKDLESIKEDSKNNTIHGNVLRFRR 119
Query: 62 RIRISCSKRLADKSKN 15
SKR D+ KN
Sbjct: 120 EYENEDSKRKLDEMKN 135
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
AKLEK++++I K ++ E E+ R + E + +D+ E ++ KYK +E +
Sbjct: 91 AKLEKQLEKINEKGEQDVKEV--EQQRVKLEEQRTEDLVKHHESMANLSEKKYKEIEKQ 147
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/66 (19%), Positives = 34/66 (51%)
Frame = -1
Query: 200 KNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSKRLADKS 21
+ S+++ M KK++++KK+ + K I L++ + K+ ++ K + +
Sbjct: 122 RTENSMKSKMEKAKKKLDEMKKKKIVQDKKISRLRSDIARSEKSFDKVEKDIHKEIQRQM 181
Query: 20 KNKKKR 3
+N+ K+
Sbjct: 182 ENETKK 187
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAM-SDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVY 75
E++KN + L+A LKN S A+ +K E +E++++ +E LK +
Sbjct: 405 EKVKNNSKAVASLNAQLKNELSYTKAVHKRILKDKEQCIEELENRIMKLETLKET--ETF 462
Query: 74 KNRPRIRISCSKRLADKSKNK 12
+ + I S + L D +K
Sbjct: 463 EEKREINKSATNELTDMEISK 483
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
K+EK+++ +R K + + K ++TE+ KD+ A + ++ ++ K L E +
Sbjct: 97 KMEKDLNLLRGKWGHDSTSV---KVMYETELRSAKDLIADSDKERAQLEDQIKKLVEELN 153
Query: 280 NLSNQ 266
N N+
Sbjct: 154 NYRNK 158
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
K+EK+++ +R K + + K ++TE+ KD+ A + ++ ++ K L E +
Sbjct: 78 KMEKDLNLLRGKWGHDSTSV---KVMYETELRSAKDLIADSDKERAQLEDQIKKLVEELN 134
Query: 280 NLSNQ 266
N N+
Sbjct: 135 NYRNK 139
>U13644-4|AAB52682.1| 412|Caenorhabditis elegans Hypothetical
protein F56D2.3 protein.
Length = 412
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSE--FPNEKNRFQTEIAKLKDVNAKLEGD-KDVFAN 311
K+M + L E DEIRSK + N K + + +L KLE + K + N
Sbjct: 260 KQMHIRRVLANESDEIRSKFADIHKRLIMKNNKMTVSSPVPELSKQAKKLEKEAKKIMEN 319
Query: 310 KYKALENETSNL 275
K ++E + L
Sbjct: 320 KKMSVEKKQEKL 331
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDS 123
+N ++A+L++ T L+ + S +I+D+ K IDS
Sbjct: 3730 LNDVAAELEDETLLKQSASQVANEIDDISKMIDS 3763
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDS 123
+N ++A+L++ T L+ + S +I+D+ K IDS
Sbjct: 4684 LNDVAAELEDETLLKQSASQVANEIDDISKMIDS 4717
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDS 123
+N ++A+L++ T L+ + S +I+D+ K IDS
Sbjct: 5587 LNDVAAELEDETLLKQSASQVANEIDDISKMIDS 5620
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDS 123
+N ++A+L++ T L+ + S +I+D+ K IDS
Sbjct: 6490 LNDVAAELEDETLLKQSASQVANEIDDISKMIDS 6523
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDS 123
+N ++A+L++ T L+ + S +I+D+ K IDS
Sbjct: 7393 LNDVAAELEDETLLKQSASQVANEIDDISKMIDS 7426
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKD---IE*LKNQVGNVYKN 69
K + DL+K I G D + LKN VGN KN
Sbjct: 3164 KFVSDLEKNIQKTGDDEKRADELKNDVGNAVKN 3196
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKD---IE*LKNQVGNVYKN 69
K + DL+K I G D + LKN VGN KN
Sbjct: 5021 KFVSDLEKNIQKTGDDEKRADELKNDVGNAVKN 5053
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKD---IE*LKNQVGNVYKN 69
K + DL+K I G D + LKN VGN KN
Sbjct: 5924 KFVSDLEKNIQKTGDDEKRADELKNDVGNAVKN 5956
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKD---IE*LKNQVGNVYKN 69
K + DL+K I G D + LKN VGN KN
Sbjct: 6827 KFVSDLEKNIQKTGDDEKRADELKNDVGNAVKN 6859
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -1
Query: 158 KKIEDLKKEIDSKGKD---IE*LKNQVGNVYKN 69
K + DL+K I G D + LKN VGN KN
Sbjct: 7730 KFVSDLEKNIQKTGDDEKRADELKNDVGNAVKN 7762
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSD-CMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRIS 48
+NK++ + K +Q + CMK++EDL+ +++K + + + + Y+ ++ +
Sbjct: 154 LNKINLEAKAQEKIQEEIIQRCMKRVEDLESILETKEQKLNDFEER---EYETTCQLTMK 210
Query: 47 CSKRLADKSK 18
S LA+K +
Sbjct: 211 HSLELAEKDQ 220
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 502 KNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVN-AKLEGDK 326
K + KE A AKL+KE D+ + + + N+ Q AKLK N KL+ +
Sbjct: 6954 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7013
Query: 325 DVFANK 308
D K
Sbjct: 7014 DAKLKK 7019
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 502 KNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVN-AKLEGDK 326
K + KE A AKL+KE D+ + + + N+ Q AKLK N KL+ +
Sbjct: 6974 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7033
Query: 325 DVFANK 308
D K
Sbjct: 7034 DAKLKK 7039
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 502 KNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVN-AKLEGDK 326
K + KE A AKL+KE D+ + + + N+ Q AKLK N KL+ +
Sbjct: 6974 KETSVESKETQADAKLKKEKDDKHKQEADAKLQKENDDKLKQEADAKLKKENDDKLKQEA 7033
Query: 325 DVFANK 308
D K
Sbjct: 7034 DAKLKK 7039
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 221 NKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCS 42
++L L N S + A + + + L+ EID K K+I L+ ++ N K SCS
Sbjct: 860 SQLDEQLSNLISEKEASVELSIENDKLRSEIDRKSKEIGDLQRKMNNYEKLSQSRTGSCS 919
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANK 308
S +E P + + ++ E+R + K E E R +TE+ D ++ + D+DV K
Sbjct: 351 SKEETPEEKEKREQSREVRKQRRKLREERRKEVERQRTEVKNPDDYDSDVVTDEDV-GEK 409
Query: 307 YKALENETSNL 275
+ + N+ +
Sbjct: 410 EECVNNDVPKM 420
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANK 308
S +E P + + ++ E+R + K E E R +TE+ D ++ + D+DV K
Sbjct: 351 SKEETPEEKEKREQSREVRKQRRKLREERRKEVERQRTEVKNPDDYDSDVVTDEDV-GEK 409
Query: 307 YKALENETSNL 275
+ + N+ +
Sbjct: 410 EECVNNDVPKM 420
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Frame = -1
Query: 227 QINKLSADLKNATSLQTA---MSDCMK-KIEDLKKEIDSKGKDIE 105
+I+ L ++K+ TSL+ +++ +K K+EDL K++DS +IE
Sbjct: 43 EIDDLKENIKDQTSLREKAENLNESLKTKVEDLAKKVDSIEGEIE 87
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLE 335
K + ++DE + +L++ D+ ++ N E+AKLK KLE
Sbjct: 238 KEKTKLDEQKVELNQKDNNVKSQLNDVIAEMAKLKTDKKKLE 279
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -1
Query: 221 NKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCS 42
++L L N S + A + + + L+ EID K K+I L+ ++ N K SCS
Sbjct: 860 SQLDEQLSNLISEKEASVELSIENDKLRSEIDRKSKEIGDLQRKMNNYEKLSQSRTGSCS 919
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANK 308
S +E P + + ++ E+R + K E E R +TE+ D ++ + D+DV K
Sbjct: 351 SKEETPEEKEKREQSREVRKQRRKLREERRKEVERQRTEVKNPDDYDSDVVTDEDV-GEK 409
Query: 307 YKALENETSNL 275
+ + N+ +
Sbjct: 410 EECVNNDVPKM 420
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEK----EIDEIRSKLSK--NDSEFPNEKNRFQT-EIAKLKD- 353
V N GLS K +P+K L + + D++++ + + N+ F +KN+ T ++ + +D
Sbjct: 667 VTPNTGLSVKRIPSKENLLEIKCSKCDQLQTSIDEQANEISFYKKKNKDLTNQVLQTEDR 726
Query: 352 VNAKLEGDKDVFANKYKALENETSNLSNQ 266
++E + +F + K L ++ Q
Sbjct: 727 WTIEIEKQRQIFEKEIKTLGIRVADAKRQ 755
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEK----EIDEIRSKLSK--NDSEFPNEKNRFQT-EIAKLKD- 353
V N GLS K +P+K L + + D++++ + + N+ F +KN+ T ++ + +D
Sbjct: 667 VTPNTGLSVKRIPSKENLLEIKCSKCDQLQTSIDEQANEISFYKKKNKDLTNQVLQTEDR 726
Query: 352 VNAKLEGDKDVFANKYKALENETSNLSNQ 266
++E + +F + K L ++ Q
Sbjct: 727 WTIEIEKQRQIFEKEIKTLGIRVADAKRQ 755
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = -2
Query: 508 VMKNAGLSGKEMPAKAKLEK----EIDEIRSKLSK--NDSEFPNEKNRFQT-EIAKLKD- 353
V N GLS K +P+K L + + D++++ + + N+ F +KN+ T ++ + +D
Sbjct: 667 VTPNTGLSVKRIPSKENLLEIKCSKCDQLQTSIDEQANEISFYKKKNKDLTNQVLQTEDR 726
Query: 352 VNAKLEGDKDVFANKYKALENETSNLSNQ 266
++E + +F + K L ++ Q
Sbjct: 727 WTIEIEKQRQIFEKEIKTLGIRVADAKRQ 755
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK-DVFANKYKALEN 290
K K+EKE + + K + E EK + + E K ++ K+E +K K KA E
Sbjct: 936 KVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQKIKAAEE 995
Query: 289 E 287
E
Sbjct: 996 E 996
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEI-AKLKDVNAKLEGDKDVFANKYKALEN 290
K +LEK++DE R L ++++ +E + E+ +L+++ KLE + K E
Sbjct: 270 KRELEKQMDEQRQTLEQDNARNQSEYDMKMREMREELQNLERKLEARPPCCCSSQKQSEE 329
Query: 289 ETSNL 275
N+
Sbjct: 330 SERNV 334
>U80836-4|AAB37891.2| 329|Caenorhabditis elegans Hypothetical
protein B0432.6 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/60 (18%), Positives = 31/60 (51%)
Frame = -2
Query: 514 VCVMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLE 335
+C+ + AGL + + E+ + ++++SK ++E R + +A+ +++ + E
Sbjct: 161 MCITEKAGLKTQLTESLQNAERNVHTAQNEISKLNTELAQSVTRIELFLAENRELKQEFE 220
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE 105
I ++ + ++ Q +KIEDLK E+D K + +E
Sbjct: 708 IRNMNQVVTTQSNNQEQFEQVRRKIEDLKVEVDKKSEHLE 747
>U42846-2|AAA83601.1| 108|Caenorhabditis elegans Hypothetical
protein T19D2.3 protein.
Length = 108
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 184 RDVAFLRSALNLFI*ASLFFISSVAFCTDCLNCW 285
RDV + A+ LF+ A + S F T CL C+
Sbjct: 25 RDVESVAFAVLLFLAAGIVLFISCFFVTKCLQCY 58
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
EKEI ++++S+ D+E + R LK+ +L G + + + L ET+
Sbjct: 808 EKEIQSFQTQISEKDNEVLTKAERINELETCLKEREVELTGMRTKLDDMTQQLNEETT 865
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 496 AGLSGKEMPAK-AKLEKEIDEIRSKLSKNDSEFPN---EKNRFQTEIAKLKDVNAKLE 335
AG S K + AK LE E+ +++ K +K S +KN L++V+AK+E
Sbjct: 351 AGYSSKTLGAKNLDLELELKQLKEKQNKLKSGIQRNRGDKNTVSKMSESLREVDAKIE 408
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTE----IAKLKDVNAKLE 335
K K+ KE++++ + + +E+ NE+NR ++ + +L++ KLE
Sbjct: 855 KEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLE 902
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTE----IAKLKDVNAKLE 335
K K+ KE++++ + + +E+ NE+NR ++ + +L++ KLE
Sbjct: 855 KEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLE 902
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTE----IAKLKDVNAKLE 335
K K+ KE++++ + + +E+ NE+NR ++ + +L++ KLE
Sbjct: 615 KEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLE 662
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTE----IAKLKDVNAKLE 335
K K+ KE++++ + + +E+ NE+NR ++ + +L++ KLE
Sbjct: 855 KEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLE 902
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKE 132
EE + R+ + ++L L++ ++ M+DC+K+++D KE
Sbjct: 1084 EECRKRKNEASRLERKLEDKEAM---MADCVKELKDSHKE 1120
>AF067211-6|AAC16989.1| 308|Caenorhabditis elegans Serpentine
receptor, class z protein85, isoform a protein.
Length = 308
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 475 FPYQIILRFSSHIHLPYFTFQIFNHFF 555
FP+ I RF S +LP F + ++ FF
Sbjct: 114 FPFHIFTRFLSRRNLPDFIWYLYAFFF 140
>AF067211-5|AAW88420.1| 329|Caenorhabditis elegans Serpentine
receptor, class z protein85, isoform b protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 475 FPYQIILRFSSHIHLPYFTFQIFNHFF 555
FP+ I RF S +LP F + ++ FF
Sbjct: 135 FPFHIFTRFLSRRNLPDFIWYLYAFFF 161
>AF022971-1|AAG23975.1| 380|Caenorhabditis elegans Hypothetical
protein C31B8.4 protein.
Length = 380
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYK 302
K A +K++ E + SKL +N E N+ + K+K ++ K+E +D + +
Sbjct: 104 KHQMAISKMKAEHNAEISKLEENIKEAKNDGKQ------KVKSIDDKIESVQDERSKTLE 157
Query: 301 ALENETSNLSNQ 266
A E N+S++
Sbjct: 158 AHSKEIQNMSDE 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,994,981
Number of Sequences: 27780
Number of extensions: 160768
Number of successful extensions: 1015
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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