Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0221
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 36 0.019
At5g61460.1 68418.m07712 structural maintenance of chromosomes (... 31 0.41
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 31 0.41
At1g50800.1 68414.m05713 hypothetical protein 31 0.54
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 30 0.95
At4g36120.1 68417.m05141 expressed protein 30 1.2
At4g02710.1 68417.m00366 kinase interacting family protein simil... 30 1.2
At1g47900.1 68414.m05334 expressed protein 30 1.2
At3g05990.1 68416.m00684 leucine-rich repeat family protein cont... 29 1.7
At4g05040.2 68417.m00741 ankyrin repeat family protein contains ... 29 2.2
At4g05040.1 68417.m00740 ankyrin repeat family protein contains ... 29 2.2
At4g04400.1 68417.m00634 hypothetical protein contains Pfam prof... 29 2.2
At3g45380.1 68416.m04899 hypothetical protein contains Pfam prof... 29 2.2
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 29 2.2
At1g24560.1 68414.m03090 expressed protein 29 2.2
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 2.9
At5g57610.1 68418.m07197 protein kinase family protein similar t... 29 2.9
At5g11760.1 68418.m01373 expressed protein 29 2.9
At3g24490.1 68416.m03071 expressed protein similar to 6b-interac... 29 2.9
At3g24320.1 68416.m03054 DNA mismatch repair MutS family (MSH1) ... 29 2.9
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 2.9
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 29 2.9
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 29 2.9
At3g32190.1 68416.m04102 hypothetical protein 28 3.8
At2g33793.1 68415.m04145 expressed protein 28 3.8
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 3.8
At1g54920.2 68414.m06269 expressed protein 28 3.8
At1g54920.1 68414.m06270 expressed protein 28 3.8
At3g55060.1 68416.m06115 expressed protein contains weak similar... 28 5.0
At3g47460.1 68416.m05161 SMC2-like condensin, putative similar t... 28 5.0
At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKL... 28 5.0
At2g20010.1 68415.m02339 expressed protein 28 5.0
At1g78355.1 68414.m09131 hypothetical protein 28 5.0
At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 28 5.0
At1g68790.1 68414.m07863 expressed protein 28 5.0
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 28 5.0
At4g31340.1 68417.m04445 myosin heavy chain-related contains wea... 27 6.7
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 6.7
At3g26125.1 68416.m03258 cytochrome P450, putative 27 6.7
At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N domain-... 27 6.7
At5g28860.1 68418.m03551 hypothetical protein 27 8.8
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 27 8.8
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 27 8.8
At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3... 27 8.8
At3g01800.1 68416.m00122 ribosome recycling factor family protei... 27 8.8
At2g45460.1 68415.m05654 forkhead-associated domain-containing p... 27 8.8
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 8.8
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 8.8
At1g03080.1 68414.m00282 kinase interacting family protein simil... 27 8.8
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 35.9 bits (79), Expect = 0.019
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 463 AKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKL-EGDKDVFANKYKALENE 287
AKLE ++D++ ++L +D + + E KL + NAK+ E KD A E
Sbjct: 683 AKLEHKVDDLENRLGHHDGKASGSTHSASKESRKLPEHNAKMKEKQKDTEAASTHISERS 742
Query: 286 TSNLSN 269
TS N
Sbjct: 743 TSKTGN 748
>At5g61460.1 68418.m07712 structural maintenance of chromosomes
(SMC) family protein very strong similarity to SMC-like
protein (MIM) [Arabidopsis thaliana] GI:5880614;
contains Pfam profile PF02463: RecF/RecN/SMC N terminal
domain
Length = 1057
Score = 31.5 bits (68), Expect = 0.41
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = -1
Query: 245 MKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNR 66
+K E + NKL+A +N D ++ E+ K+I+ + E K N+ KN+
Sbjct: 743 LKEAELKANKLTALFENMRESAKGEIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNK 802
Query: 65 PRIRISCSKRLADKSKNKKK 6
I ++ ++ KNK+K
Sbjct: 803 VLPDIKNAEANYEELKNKRK 822
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 31.5 bits (68), Expect = 0.41
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE 105
+ E +KN A+ N A L+ L++ M+ ++E +KE+ +K K++E
Sbjct: 422 SNENLKNPSAERNSADALLREVEELKSLMAARDGELEARRKELKAKNKELE 472
>At1g50800.1 68414.m05713 hypothetical protein
Length = 227
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/60 (26%), Positives = 34/60 (56%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNLSN 269
E D I +++++DS+ +E + + + ++ D +GDKD + YK++ +S+ SN
Sbjct: 65 EDDAIAGEMTRSDSKLCSETEK-ENDDGRINDKVQASKGDKDETSKTYKSMVLSSSDKSN 123
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 30.3 bits (65), Expect = 0.95
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANK 308
+G AK KLEK+++E+ +L ++ R E AK K NAK E + NK
Sbjct: 884 TGALQEAKNKLEKQVEELTWRLQLE------KRMRTDLEEAK-KQENAKYESSLEEIQNK 936
Query: 307 YKALE 293
+K E
Sbjct: 937 FKETE 941
>At4g36120.1 68417.m05141 expressed protein
Length = 981
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
++E+EI ++ LS ++E +N + KLK LEG +F N A ++ +
Sbjct: 365 EMEEEIQTLKEHLSARNNELQVSRNVCAKTLGKLKI----LEGQMHMFNNDKNAPKSNSR 420
Query: 280 NLS 272
NLS
Sbjct: 421 NLS 423
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
K ++I ++ LS E ++ +TE LK AK E DK+ +Y+ N S
Sbjct: 293 KCLQKIADLEDGLSVAHKEAGERASKAETETLALKRSLAKAETDKETALIQYRQCLNTIS 352
Query: 280 NLSNQ 266
NL +
Sbjct: 353 NLEER 357
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -1
Query: 224 INKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDI 108
++KL+A+ A L A+ +CM++I +LKK+ + K D+
Sbjct: 169 LSKLTAE-DRAAHLDGALKECMRQIRNLKKDHEVKLHDV 206
>At3g05990.1 68416.m00684 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leaf
senescence-associated receptor-like protein kinase
[Phaseolus vulgaris] gi|9837280|gb|AAG00510
Length = 517
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 324 SLSPSNLALTSFSFAISVWNLFFSFGNSESFFDSLERISSISFSNLAFAGISLPDN 491
SL+P+ LT+ S S+W S S F SL+R+ S+ F + F+G S+P +
Sbjct: 420 SLAPAVAKLTALS---SIWLGNNSLSGSLPDFSSLKRLESLHFEDNLFSG-SIPSS 471
>At4g05040.2 68417.m00741 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 572
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -2
Query: 499 NAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAK-LKDV--NAKLEGD 329
N G+S M +A + EI ND E N + E K L V NA+ G
Sbjct: 229 NEGISSLYMAVEAGDVTLVKEILKTAGNNDLEGRNSNLDSKLEGRKHLVHVALNARSIGV 288
Query: 328 KDVFANKYKALENETSNLSNQC 263
DV N+Y +LE+E C
Sbjct: 289 LDVILNEYPSLEDERDEEGRTC 310
>At4g05040.1 68417.m00740 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 572
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -2
Query: 499 NAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAK-LKDV--NAKLEGD 329
N G+S M +A + EI ND E N + E K L V NA+ G
Sbjct: 229 NEGISSLYMAVEAGDVTLVKEILKTAGNNDLEGRNSNLDSKLEGRKHLVHVALNARSIGV 288
Query: 328 KDVFANKYKALENETSNLSNQC 263
DV N+Y +LE+E C
Sbjct: 289 LDVILNEYPSLEDERDEEGRTC 310
>At4g04400.1 68417.m00634 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 735
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 203 LKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRI 51
LK +++A+SDC + + KE KG +E + ++GN K+ P I +
Sbjct: 441 LKFRVPVRSALSDCPRMCKHKFKECSMKGVPLEVIYKELGNT-KDFPSILV 490
>At3g45380.1 68416.m04899 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 690
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 203 LKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRI 51
LK +++A+SDC + + KE KG +E + ++GN K+ P I +
Sbjct: 409 LKFRVHVRSALSDCPRMCKHKFKECSMKGVPLEVIYKELGNT-KDFPSILV 458
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDS-----EFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALEN 290
+KEI+E+RSKL + S E N +N + + + +LE +K A + + L+
Sbjct: 347 KKEIEELRSKLKTSHSDHSEEEILNLRNTLLKSELERERIALELEEEKKAQAQRERVLQE 406
Query: 289 ETSNLSN 269
+ + N
Sbjct: 407 QAKKIKN 413
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -1
Query: 248 EMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKN 69
E K REA + S + L+ + +KK ++ K+E D K+ E L N++ NV K
Sbjct: 47 EKKAREAAESSKSELQVSFNRLKALAVEAIKKRDESKRERDEALKEKENLTNELENVNKG 106
Query: 68 R 66
+
Sbjct: 107 K 107
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
ATEE NR+ + L + + L + + +ED +K +DS + +E LK++ +
Sbjct: 466 ATEEDINRKTTM--LEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSEL 523
>At5g57610.1 68418.m07197 protein kinase family protein similar to
protein kinase [Glycine max] GI:170047, MAP3K delta-1
protein kinase [Arabidopsis thaliana] GI:2253010;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1054
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 505 MKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
+K A L G KA E+ D++R +L +N+SE N ++ + + N K+E K
Sbjct: 705 VKRAALEGAA-EVKAHPEEAKDQVRPELVENESEHMNAQDEPEIDSDSDNPNNFKIEQTK 763
Query: 325 DVFANKYKALEN 290
K + L++
Sbjct: 764 AEAEAKSRGLQS 775
>At5g11760.1 68418.m01373 expressed protein
Length = 181
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 481 KEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRF--QTEIAKLKDVNAKLEGDKDVFANK 308
K +P K+ KEID+I + S+ E N ++R + ++++ +D A++ + +V N
Sbjct: 28 KLVPKPGKIGKEIDDIFAGRSQRTPEVQNPESRDTPEAQVSESRDTRAEM-NELNVGVNN 86
Query: 307 YKALENETSNLSN 269
T LSN
Sbjct: 87 NTESRPRTRILSN 99
>At3g24490.1 68416.m03071 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 333
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = -2
Query: 469 AKAKLEKEIDEIRSKLSKNDSEFPNEK--NRFQTEIAKLKDVNAKLEGDKDVFANKYKAL 296
+K + KE++++R+ + D E ++ +R Q+EIA+L++ G D ++ + +
Sbjct: 264 SKKEQMKELEKMRADFQR-DLELQKKQIVDRAQSEIARLREEEENHHGGGDDDESEDEEM 322
Query: 295 ENETS-NLSNQ 266
EN++ NLS++
Sbjct: 323 ENDSDVNLSDE 333
>At3g24320.1 68416.m03054 DNA mismatch repair MutS family (MSH1) low
similarity to SP|Q56239 DNA mismatch repair protein mutS
{Thermus aquaticus}; contains Pfam profiles PF05190:
MutS family domain IV, PF01624: MutS domain I, PF01541:
Endo/excinuclease amino terminal domain
Length = 1118
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -2
Query: 514 VCVMKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDV 350
+C G+SG +PA++ D I + DS + K+ FQ E+++++ +
Sbjct: 781 ICAAALLGISGLMVPAESACIPHFDSIMLHMKSYDSPV-DGKSSFQVEMSEIRSI 834
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNLSN 269
E++E S ++ N + +TE+ LK +++L +K+ +Y SNL
Sbjct: 248 ELEESFSHAQEDVKGLTNRATKAETEVENLKQAHSRLHSEKEAGLAEYNRCLEMISNLEK 307
Query: 268 Q 266
+
Sbjct: 308 K 308
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGN 81
EE+KN E+Q++ L K M +ED + EIDS ++ ++N+ N
Sbjct: 455 EELKNCESQVDSLKLASKETNEKYEKM------LEDARNEIDSLKSTVDSIQNEFEN 505
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 493 GLSGKEMPAKAKLEKEIDEIRSKLSKNDS-EFPNEKNRFQTEIAKLKDVNAKLEGDKDVF 317
GL ++ + +LE + KL+ N+ E ++ + I LKD+ + G+ DV+
Sbjct: 665 GLCEEDHASSLRLESSSSDDADKLAINEIFEVAFNESERGSLILFLKDIEKSVSGNTDVY 724
Query: 316 ANKYKALENETSNL 275
LEN N+
Sbjct: 725 ITLKSKLENLPENI 738
>At3g32190.1 68416.m04102 hypothetical protein
Length = 358
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENE 287
K KLE +++ + SKL +++ E ++ R+ +L + +L + +N Y L N+
Sbjct: 94 KQKLEDQLENLSSKLMQSNGELQDQYQRYDKIQEELSNARGRLSESE---SNAYD-LSNQ 149
Query: 286 TSNL 275
S L
Sbjct: 150 LSKL 153
>At2g33793.1 68415.m04145 expressed protein
Length = 212
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 466 KAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDK 326
K+KLEKE LSK+ E +N + E AK ++++ K DK
Sbjct: 81 KSKLEKERQNFSKALSKSSKEC---ENILKDEAAKFEELHKKFVKDK 124
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAK-LKDVNAKLE 335
+++ +IDE++SKL K F ++ E LKD AK E
Sbjct: 72 EVKSKIDELKSKLEKERQNFSKALSKSSKECENILKDEAAKFE 114
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 460 KLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETS 281
+L E ++++S++S + E FQ+ +L+ V AKLE V ++K L +E
Sbjct: 501 QLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQSVIAKLEEQLTVESSKADTLVSEIE 560
Query: 280 NL 275
L
Sbjct: 561 KL 562
>At1g54920.2 68414.m06269 expressed protein
Length = 890
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -2
Query: 406 EFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNLSN 269
EF ++ FQ +KD +++ GD ++ K+ ++ENE N S+
Sbjct: 509 EFDDDSWEFQGPTQPVKDSMSRI-GDNGLWEYKHSSVENEVGNQSS 553
>At1g54920.1 68414.m06270 expressed protein
Length = 430
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -2
Query: 406 EFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSNLSN 269
EF ++ FQ +KD +++ GD ++ K+ ++ENE N S+
Sbjct: 173 EFDDDSWEFQGPTQPVKDSMSRI-GDNGLWEYKHSSVENEVGNQSS 217
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -2
Query: 490 LSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFAN 311
L ++ +A LEKE+D + + +F E+ + + + +L + N L+ + F
Sbjct: 393 LEKEKSELQAGLEKELDRRSGEWTSKLEKFQLEEKKLRERVRELAEHNVSLQRELSAFH- 451
Query: 310 KYKALENETSN 278
ENET N
Sbjct: 452 -----ENETEN 457
>At3g47460.1 68416.m05161 SMC2-like condensin, putative similar to
SMC2-like condensin (TITAN3) [Arabidopsis thaliana]
GI:14279543; contains Pfam profiles PF02483: SMC family
C-terminal domain, PF02463: RecF/RecN/SMC N terminal
domain
Length = 1171
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 469 AKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD-KDVFAN 311
A KLE+E++E+RS++ + + + + + T +KD + EG KD+ N
Sbjct: 739 AVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEKN 792
>At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKLE)
identical to chromatin remodeling factor CHD3
[Arabidopsis thaliana] GI:6478518
Length = 1384
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 406 EFPNEKNRFQTEIAKLKDVNAKLEGDKDV 320
E ++ + FQ EI + KDVN++ KDV
Sbjct: 222 ESESDISTFQNEIQRFKDVNSRTRRSKDV 250
>At2g20010.1 68415.m02339 expressed protein
Length = 834
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -1
Query: 206 DLKNATSLQTAMS--DCMKKI--EDLKKEIDSKGKDIE*LKNQVGNVYKNRPRIRISCSK 39
++ N +L+T +S + K+ ED+ E K K ++ +++V ++ R+ +K
Sbjct: 255 NIDNVETLETTVSLGILVAKVLGEDISSEYRRKKKHVDSGRDRVDTYIRSSLRMAFQQTK 314
Query: 38 RLADKSKNKKKR 3
R+ + SK K R
Sbjct: 315 RMVEHSKKSKSR 326
>At1g78355.1 68414.m09131 hypothetical protein
Length = 149
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGD 329
+E+ + K+S D+E N K EIA LK++ +L+ D
Sbjct: 61 EEVVDALPKISSIDNEIINAKAEVAVEIANLKELMIELKED 101
>At1g75260.1 68414.m08743 isoflavone reductase family protein
similar to SP|P52577 Isoflavone reductase homolog P3 (EC
1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile
PF02716: Isoflavone reductase
Length = 593
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Frame = -1
Query: 251 EEMKNREAQINKLSADLKNATSLQTAMSD------CMKKIEDLKKEIDSKGKDIE*LKNQ 90
EE + A IN + + N+ +++++S+ K E LKKE+ +++E K +
Sbjct: 400 EEEASFTAYINGNTQGINNSIVVESSVSENDPGVHMSFKFEILKKEVIYPPENVEEKKPE 459
Query: 89 VGNV---YKNRPRIRISCSKRLADKSKNKK 9
V KN PR+R C + L +S +
Sbjct: 460 TVTVTKKLKNEPRVRRRCLRGLLAESSESE 489
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 448 EIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNA 344
E+D +RS L + EF E+ RF + KLK ++
Sbjct: 691 ELDVLRSSLKEKRKEFICERERFLVFLEKLKSCSS 725
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 233 EAQINKLSADLKNA--TSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
E Q+ KL+ D K + LQT + + +DLK + ++E K QV +V
Sbjct: 802 ELQVIKLAKDEKETAISLLQTELETVRSQCDDLKHSLSENDLEMEKHKKQVAHV 855
>At4g31340.1 68417.m04445 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, nonmuscle type A
(Cellular myosin heavy chain, type A) (Nonmuscle myosin
heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo
sapiens]
Length = 437
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -1
Query: 257 ATEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNV 78
A E K E N L K S + ++ KK+ +L +D K E KN++G +
Sbjct: 114 ADELEKQVEVLKNFLEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNEEQKNKIGKL 173
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 239 NREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE 105
N + +++ L T L T + +C K+ E +KK ++S D++
Sbjct: 420 NEKTATSQIQNLLSEKTELATELENCKKEEEKIKKAMESLTLDLQ 464
>At3g26125.1 68416.m03258 cytochrome P450, putative
Length = 541
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 393 SFGNSESFFDSLERISSISFSNLAFAGISLPDNPAFFITHTSPLFHIPNLQPF 551
SF S+ FD E + ++F N+ AG L D+P T L H+P + F
Sbjct: 176 SFSKSQEAFDLQEILLRLTFDNICIAG--LGDDPG---TLDDDLPHVPFAKAF 223
>At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N
domain-containing protein weak similarity to SP|P45974
Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)
{Homo sapiens}; contains Pfam profile PF00627: UBA/TS-N
domain
Length = 413
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 218 KLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGK-DIE*LKNQVGNVYKN 69
K++ ++ AT + M +C++ ++ KE D+K K + L +GNV KN
Sbjct: 289 KVTLPIRPATKTEQ-MRECLRSLKQAHKEDDAKVKRAFQTLLTYMGNVAKN 338
>At5g28860.1 68418.m03551 hypothetical protein
Length = 183
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 451 KEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALE 293
+E+ R+K K DS P E + E+AK++ K+ D F KALE
Sbjct: 102 RELQYFRNKKRKVDSR-PEE---LEAEVAKIRAKQKKVTARLDEFKQMVKALE 150
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -2
Query: 454 EKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKDVFANKYKALENETSN 278
EKE D RS+ + E +++ E K K + E DK+ N++K ENE N
Sbjct: 61 EKERDRKRSRDEDTEKEISRGRDK---EREKDKSRDRVKEKDKEKERNRHKDRENERDN 116
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/77 (24%), Positives = 40/77 (51%)
Frame = -1
Query: 254 TEEMKNREAQINKLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVY 75
T K + + + LS ++ SLQ +S +D K+ DS ++ L+N++ V
Sbjct: 251 TRAEKEKSSILENLSTLRGHSKSLQDQLSSSRVLQDDAIKQKDSLLSEVTNLRNELQQVR 310
Query: 74 KNRPRIRISCSKRLADK 24
+R R ++ S++L+++
Sbjct: 311 DDRDR-QVVQSQKLSEE 326
>At3g09370.1 68416.m01111 myb family transcription factor (MYB3R3)
contains Pfam profile: Myb DNA-binding proteins;
identical to cDNA putative c-myb-like transcription
factor (MYB3R3) GI:15375285
Length = 505
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 155 KIEDLKKEIDSK---GKDIE*LKNQVGNVYKNRPRIRISCSKRLADKSK 18
K D KE+D K GKD ++N N Y P RI + KS+
Sbjct: 424 KKTDEAKEVDQKVNDGKDSSEIQNNGSNAYNLSPPYRIRSKRTAVFKSR 472
>At3g01800.1 68416.m00122 ribosome recycling factor family protein /
ribosome releasing factor family protein similar to
SP|P82231 Ribosome recycling factor, chloroplast
precursor (Ribosome releasing factor, chloroplast) (RRF)
(CpFrr) (RRFHCP) {Spinacia oleracea}; contains Pfam
profile PF01765: ribosome recycling factor
Length = 267
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 505 MKNAGLSGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTE 371
+K AG S + K +LEKE+DE+ K K+ + K + TE
Sbjct: 223 IKKAGSSLPKDEVK-RLEKEVDELTKKFVKSAEDMCKSKEKEITE 266
>At2g45460.1 68415.m05654 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 915
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 248 EMKNRE-AQINKLSADLKNA-TSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LK 96
+ K +E AQ+NKLSA+ KN+ L +S ++ + + + I S+ I LK
Sbjct: 307 DTKQKELAQVNKLSAEQKNSIDELGERVSASLQTLSEANEVIQSQKASIAELK 359
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843 DIL
domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFPNEKNRFQTEIAKLKDVNAKLEGDKD 323
+G AK KLEK ++E+ +L ++ + ++ EIAKL++ +L+ D
Sbjct: 883 TGALKEAKDKLEKRVEELTWRLELEKNQKADLEDAKAQEIAKLQNNLTELQEKLD 937
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 245 MKNREAQIN-KLSADLKNATSLQTAMSDCMKKIEDLKKEIDSKGKDIE*LKNQVGNVYKN 69
+K+ Q+ KL A +A + + + KI L+KE+ + KD+ + ++ + +
Sbjct: 1380 LKDEVRQLEEKLKAKDAHAEDCKKVLLEKQNKISLLEKELTNCKKDLSEREKRLDDAQQA 1439
Query: 68 RPRIRISCSKRLADKSKNKK 9
+ ++ +K+ + KNKK
Sbjct: 1440 QATMQSEFNKQKQELEKNKK 1459
>At1g03080.1 68414.m00282 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 27.1 bits (57), Expect = 8.8
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -2
Query: 487 SGKEMPAKAKLEKEIDEIRSKLSKNDSEFP---NEK-NRFQTEIAKLKDVNAKLEGDKDV 320
+G E +K ++DE S + SE +EK R Q EI +L+ + KLEGD++
Sbjct: 1638 NGFERSDGSKSSMDLDENESSRRRRISEQARRGSEKIGRLQLEIQRLQFLLLKLEGDRED 1697
Query: 319 FANKYKALENET 284
A K K +++T
Sbjct: 1698 RA-KAKISDSKT 1708
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,229,918
Number of Sequences: 28952
Number of extensions: 144406
Number of successful extensions: 771
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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