Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0219
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.88
AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical ... 30 1.5
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 4.7
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 27 8.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 27 8.2
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTASQPTAS 184
T + P S+P SQP S+P SQP S
Sbjct: 468 TVKSPMTPPVSQPPVSQPPVSQPPVSQPPVS 498
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQPTAS 184
S P S+P SQP S+P SQP S
Sbjct: 478 SQPPVSQPPVSQPPVSQPPVSQPPVS 503
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQP 175
S P S+P SQP S+P SQP
Sbjct: 483 SQPPVSQPPVSQPPVSQPPVSQP 505
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTASQPTAS 184
T + P S+P SQP S+P SQP S
Sbjct: 532 TVKSPMTPPVSQPPVSQPPVSQPPVSQPPVS 562
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQPTAS 184
S P S+P SQP S+P SQP S
Sbjct: 542 SQPPVSQPPVSQPPVSQPPVSQPPVS 567
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQP 175
S P S+P SQP S+P SQP
Sbjct: 547 SQPPVSQPPVSQPPVSQPPVSQP 569
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQPTAS 184
S PT S PT S PT P S PT S
Sbjct: 410 SPPTGSPPTGSPPTGRPPRGSPPTGS 435
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 101 TDSLPTASEPTASQPTASEPTASQPT 178
T S PT S PT P S PT S PT
Sbjct: 413 TGSPPTGSPPTGRPPRGSPPTGSPPT 438
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 113 PTASEPTASQPTASEPTASQPTAS 184
P S PT S PT S PT P S
Sbjct: 407 PRRSPPTGSPPTGSPPTGRPPRGS 430
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 128 PTASQPTASEPTASQPTAS 184
P S PT S PT S PT +
Sbjct: 487 PRRSPPTGSPPTGSPPTGA 505
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 98 ATDSLPTASEPTASQPT 148
A + PT S PT S PT
Sbjct: 448 APEDRPTGSPPTGSPPT 464
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQPTAS 184
S PT S PT S PT P S PT S
Sbjct: 431 SPPTGSPPTGSPPTGRPPRGSPPTGS 456
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 101 TDSLPTASEPTASQPTASEPTASQPT 178
T S PT S PT P S PT S PT
Sbjct: 434 TGSPPTGSPPTGRPPRGSPPTGSPPT 459
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 113 PTASEPTASQPTASEPTASQPTAS 184
P S PT S PT S PT P S
Sbjct: 428 PRRSPPTGSPPTGSPPTGRPPRGS 451
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 128 PTASQPTASEPTASQPTAS 184
P S PT S PT S PT +
Sbjct: 508 PRRSPPTGSPPTGSPPTGA 526
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 98 ATDSLPTASEPTASQPT 148
A + PT S PT S PT
Sbjct: 469 APEDRPTGSPPTGSPPT 485
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 107 SLPTASEPTASQPTASEPTASQPTAS 184
S PT S PT S PT P S PT S
Sbjct: 416 SPPTGSPPTGSPPTGRPPRGSPPTGS 441
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 101 TDSLPTASEPTASQPTASEPTASQPT 178
T S PT S PT P S PT S PT
Sbjct: 419 TGSPPTGSPPTGRPPRGSPPTGSPPT 444
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 113 PTASEPTASQPTASEPTASQPTAS 184
P S PT S PT S PT P S
Sbjct: 413 PRRSPPTGSPPTGSPPTGRPPRGS 436
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 128 PTASQPTASEPTASQPTAS 184
P S PT S PT S PT +
Sbjct: 493 PRRSPPTGSPPTGSPPTGA 511
Score = 22.2 bits (45), Expect(2) = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 98 ATDSLPTASEPTASQPT 148
A + PT S PT S PT
Sbjct: 454 APEDRPTGSPPTGSPPT 470
>AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical
protein C41D11.6 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 348 GQAVNAAVDHSWQAVDAVKTVEAKL 422
G V AAVDH+ Q+ DA+ T+E ++
Sbjct: 515 GTFVPAAVDHAVQSTDAITTIECRI 539
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTAS 169
TT + S T PT S+ T EPTAS
Sbjct: 187 TTTSTSTTTTETPTTSEATTHEPTAS 212
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTAS 169
TT + S T PT S+ T EPTAS
Sbjct: 137 TTTSTSTTTTETPTTSEATTHEPTAS 162
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTASQPTAS 184
TT T T SE T + PT + T ++PT +
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTT 272
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 80 CWPDTTATDSLPTASEPTASQPTASEPTASQPT 178
C P TT T + T P P + P A +PT
Sbjct: 135 CIPPTTTTTTTTTTRPPCPYPPATNTPPAPEPT 167
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 86 PDTTATDSLPTASEPTASQPTASEPTASQPTAS 184
P+TT T + T +EPT + T ++ T + PT++
Sbjct: 266 PETTTTST--TTTEPTTTTSTTTQTTTTVPTST 296
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 95 TATDSLPTASEPTASQPTASEPTASQPTAS 184
T+T +LP+ + T ++ T S PT+ Q T +
Sbjct: 547 TSTTTLPSTTASTTTKTTTSTPTSPQTTTT 576
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 95 TATDSLPTASEPTASQPTASEPTASQPTAS 184
T+T +LP+ + T ++ T S PT+ Q T +
Sbjct: 388 TSTTTLPSTTASTTTKTTTSTPTSPQTTTT 417
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 95 TATDSLPTASEPTASQPTASEPTASQPTAS 184
T+T +LP+ + T ++ T S PT+ Q T +
Sbjct: 428 TSTTTLPSTTASTTTKTTTSTPTSPQTTTT 457
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 83 WPDTTATDSLPTASEPTASQPTASEPTASQPT 178
W TT + + T+++PT + P S+P P+
Sbjct: 1980 WAKTTTSQTPSTSTKPTVTAPKRSDPIPIAPS 2011
>AF016656-1|AAB66040.1| 332|Caenorhabditis elegans Hypothetical
protein C35A11.3 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 92 TTATDSLPTASEPTASQPTASEPTASQPTAS 184
TTAT S PT +++ P+ T + PT S
Sbjct: 52 TTATSSTPTTEIFSSNSPSTETTTCASPTTS 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,380,656
Number of Sequences: 27780
Number of extensions: 46446
Number of successful extensions: 539
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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