Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0218
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14486-1|CAB54839.1| 310|Homo sapiens cytosolic serine hydroxym... 54 5e-07
Y14485-1|CAB54838.1| 483|Homo sapiens cytosolic serine hydroxym... 54 5e-07
L23928-3|AAA36019.1| 403|Homo sapiens serine hydroxymethyltrans... 54 5e-07
L23928-2|AAA36018.1| 444|Homo sapiens serine hydroxymethyltrans... 54 5e-07
L23928-1|AAA36020.1| 483|Homo sapiens serine hydroxymethyltrans... 54 5e-07
L11931-1|AAA63257.1| 483|Homo sapiens serine hydroxymethyltrans... 54 5e-07
BC038598-1|AAH38598.1| 483|Homo sapiens serine hydroxymethyltra... 54 5e-07
BC022874-1|AAH22874.1| 444|Homo sapiens serine hydroxymethyltra... 54 5e-07
BC007979-1|AAH07979.1| 483|Homo sapiens serine hydroxymethyltra... 54 5e-07
AK223552-1|BAD97272.1| 483|Homo sapiens serine hydroxymethyltra... 54 5e-07
U23143-1|AAA64572.1| 483|Homo sapiens mitochondrial serine hydr... 43 0.001
L11932-1|AAA63258.1| 474|Homo sapiens serine hydroxymethyltrans... 43 0.001
BT006866-1|AAP35512.1| 504|Homo sapiens serine hydroxymethyltra... 43 0.001
BC091501-1|AAH91501.1| 480|Homo sapiens SHMT2 protein protein. 43 0.001
BC044211-1|AAH44211.1| 504|Homo sapiens serine hydroxymethyltra... 43 0.001
BC032584-1|AAH32584.1| 494|Homo sapiens SHMT2 protein protein. 43 0.001
BC013677-1|AAH13677.1| 504|Homo sapiens serine hydroxymethyltra... 43 0.001
BC011911-1|AAH11911.1| 504|Homo sapiens serine hydroxymethyltra... 43 0.001
AK223555-1|BAD97275.1| 504|Homo sapiens serine hydroxymethyltra... 43 0.001
L36936-1|AAA57257.1| 230|Homo sapiens metase protein. 29 9.9
L23134-1|AAA59582.1| 257|Homo sapiens metase protein. 29 9.9
BC025701-1|AAH25701.1| 257|Homo sapiens granzyme M (lymphocyte ... 29 9.9
>Y14486-1|CAB54839.1| 310|Homo sapiens cytosolic serine
hydroxymethyltransferase protein.
Length = 310
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 204 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 255
>Y14485-1|CAB54838.1| 483|Homo sapiens cytosolic serine
hydroxymethyltransferase protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>L23928-3|AAA36019.1| 403|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 403
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 297 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 348
>L23928-2|AAA36018.1| 444|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 444
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 338 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 389
>L23928-1|AAA36020.1| 483|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>L11931-1|AAA63257.1| 483|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>BC038598-1|AAH38598.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>BC022874-1|AAH22874.1| 444|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 444
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 338 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 389
>BC007979-1|AAH07979.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>AK223552-1|BAD97272.1| 483|Homo sapiens serine
hydroxymethyltransferase 1 (soluble) isoform 1 variant
protein.
Length = 483
Score = 53.6 bits (123), Expect = 5e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLGQFSSLTL*RLRQTERVISAHQIAKG 307
LE CS+ACNKNT PGD SAL PSG+RLG +LT L + + AH I +G
Sbjct: 377 LEACSIACNKNTCPGDRSALRPSGLRLGT-PALTSRGLLEKDFQKVAHFIHRG 428
>U23143-1|AAA64572.1| 483|Homo sapiens mitochondrial serine
hydroxymethyltransferase protein.
Length = 483
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 379 LELVSITANKNTCPGDRSAITPGGLRLG 406
>L11932-1|AAA63258.1| 474|Homo sapiens serine
hydroxymethyltransferase protein.
Length = 474
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 370 LELVSITANKNTCPGDRSAITPGGLRLG 397
>BT006866-1|AAP35512.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 400 LELVSITANKNTCPGDRSAITPGGLRLG 427
>BC091501-1|AAH91501.1| 480|Homo sapiens SHMT2 protein protein.
Length = 480
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 376 LELVSITANKNTCPGDRSAITPGGLRLG 403
>BC044211-1|AAH44211.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 400 LELVSITANKNTCPGDRSAITPGGLRLG 427
>BC032584-1|AAH32584.1| 494|Homo sapiens SHMT2 protein protein.
Length = 494
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 390 LELVSITANKNTCPGDRSAITPGGLRLG 417
>BC013677-1|AAH13677.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 400 LELVSITANKNTCPGDRSAITPGGLRLG 427
>BC011911-1|AAH11911.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) protein.
Length = 504
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 400 LELVSITANKNTCPGDRSAITPGGLRLG 427
>AK223555-1|BAD97275.1| 504|Homo sapiens serine
hydroxymethyltransferase 2 (mitochondrial) variant
protein.
Length = 504
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1
Query: 465 LELCSVACNKNTVPGDISALNPSGIRLG 382
LEL S+ NKNT PGD SA+ P G+RLG
Sbjct: 400 LELVSITANKNTCPGDRSAITPGGLRLG 427
>L36936-1|AAA57257.1| 230|Homo sapiens metase protein.
Length = 230
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 398 LGLSALMSPGTVFLLQATLQSSRGGPVP 481
LGL L SPG F ++A +Q R PVP
Sbjct: 60 LGLHTLDSPGLTFHIKAAIQHPRYKPVP 87
>L23134-1|AAA59582.1| 257|Homo sapiens metase protein.
Length = 257
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 398 LGLSALMSPGTVFLLQATLQSSRGGPVP 481
LGL L SPG F ++A +Q R PVP
Sbjct: 79 LGLHTLDSPGLTFHIKAAIQHPRYKPVP 106
>BC025701-1|AAH25701.1| 257|Homo sapiens granzyme M (lymphocyte
met-ase 1) protein.
Length = 257
Score = 29.5 bits (63), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 398 LGLSALMSPGTVFLLQATLQSSRGGPVP 481
LGL L SPG F ++A +Q R PVP
Sbjct: 79 LGLHTLDSPGLTFHIKAAIQHPRYKPVP 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,707,995
Number of Sequences: 237096
Number of extensions: 1633410
Number of successful extensions: 6577
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6576
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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