Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0217
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p pro...    32   0.83 
AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA...    32   0.83 
AY118625-1|AAM49994.1|  177|Drosophila melanogaster RE24635p pro...    29   4.5  
AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-P...    29   4.5  
AE014134-1929|AAF52989.1|  177|Drosophila melanogaster CG7299-PA...    29   4.5  

>AY061379-1|AAL28927.1| 1180|Drosophila melanogaster LD30316p protein.
          Length = 1180

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 7    PDYLYSRRGGWSQPAQ--GKVTRPGKFGGSGGFP 102
            P  +Y R GG+ Q  Q  G+    G++GGSGG P
Sbjct: 923  PGSIYDRSGGYGQGRQMVGQSMNGGQYGGSGGGP 956


>AE014298-1715|AAF48115.2| 1180|Drosophila melanogaster CG1559-PA
            protein.
          Length = 1180

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 7    PDYLYSRRGGWSQPAQ--GKVTRPGKFGGSGGFP 102
            P  +Y R GG+ Q  Q  G+    G++GGSGG P
Sbjct: 923  PGSIYDRSGGYGQGRQMVGQSMNGGQYGGSGGGP 956


>AY118625-1|AAM49994.1|  177|Drosophila melanogaster RE24635p
           protein.
          Length = 177

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 19  YSRRGGWSQPAQGKVTRPGKFGGSGGF 99
           +  +GG+  P QG    PG F G GGF
Sbjct: 65  FGGQGGFGGPGQGGFGGPGGFEGQGGF 91


>AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-PA
            protein.
          Length = 1150

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 79   FGGSGGFPLKLGKTKPFHNPST-RSNSSPNKKCFNF 183
            FGGSGG+  + G   P  NPS+   N       FNF
Sbjct: 1097 FGGSGGYNSQFGSKLPAINPSSVLRNDLTTSSLFNF 1132


>AE014134-1929|AAF52989.1|  177|Drosophila melanogaster CG7299-PA
           protein.
          Length = 177

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 19  YSRRGGWSQPAQGKVTRPGKFGGSGGF 99
           +  +GG+  P QG    PG F G GGF
Sbjct: 65  FGGQGGFGGPGQGGFGGPGGFEGQGGF 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,831,434
Number of Sequences: 53049
Number of extensions: 701234
Number of successful extensions: 2530
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)