Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0216
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122125-1|AAM52637.1|  910|Drosophila melanogaster GH21728p pro...    29   6.6  
AE013599-2527|AAF57818.1|  910|Drosophila melanogaster CG4954-PA...    29   6.6  
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    29   8.7  

>AY122125-1|AAM52637.1|  910|Drosophila melanogaster GH21728p
           protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 443 PPKSVLSEELVAPVGACGFQVGDQEHVHHLLV 348
           P   +L   ++A +G C F+ G+ +  HH LV
Sbjct: 569 PATRILYNRMMANLGLCAFRQGNVKDAHHCLV 600


>AE013599-2527|AAF57818.1|  910|Drosophila melanogaster CG4954-PA
           protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 443 PPKSVLSEELVAPVGACGFQVGDQEHVHHLLV 348
           P   +L   ++A +G C F+ G+ +  HH LV
Sbjct: 569 PATRILYNRMMANLGLCAFRQGNVKDAHHCLV 600


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +3

Query: 324 EDSFPIVNDQEVMDVFLVANLKP-TRPNRC----YKFLAQHALRWEEDYVPHEVI 473
           E    +V+D +V     VAN  P T+P R     ++F  +H+L W E  +  EV+
Sbjct: 140 EAELTVVDDDDVPSTSQVANQHPPTKPPRSNNTDHQFDLEHSLTWLESLMGTEVV 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,721,767
Number of Sequences: 53049
Number of extensions: 863503
Number of successful extensions: 2217
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)